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Items: 1 to 20 of 84

1.

Computational Approaches for Revealing the Structure of Membrane Transporters: Case Study on Bilitranslocase.

Venko K, Roy Choudhury A, Novič M.

Comput Struct Biotechnol J. 2017 Jan 31;15:232-242. doi: 10.1016/j.csbj.2017.01.008. eCollection 2017. Review.

2.

Interplay between hydrophobicity and the positive-inside rule in determining membrane-protein topology.

Elazar A, Weinstein JJ, Prilusky J, Fleishman SJ.

Proc Natl Acad Sci U S A. 2016 Sep 13;113(37):10340-5. doi: 10.1073/pnas.1605888113. Epub 2016 Aug 25.

3.

Role of Phosphate Transport System Component PstB1 in Phosphate Internalization by Nostoc punctiforme.

Hudek L, Premachandra D, Webster WA, Bräu L.

Appl Environ Microbiol. 2016 Oct 14;82(21):6344-6356. Print 2016 Nov 1.

4.

Membranome: a database for proteome-wide analysis of single-pass membrane proteins.

Lomize AL, Lomize MA, Krolicki SR, Pogozheva ID.

Nucleic Acids Res. 2017 Jan 4;45(D1):D250-D255. doi: 10.1093/nar/gkw712. Epub 2016 Aug 10.

5.
6.

Topology based identification and comprehensive classification of four-transmembrane helix containing proteins (4TMs) in the human genome.

Attwood MM, Krishnan A, Pivotti V, Yazdi S, Almén MS, Schiöth HB.

BMC Genomics. 2016 Mar 31;17:268. doi: 10.1186/s12864-016-2592-7.

7.

Characterization of Disease-Associated Mutations in Human Transmembrane Proteins.

Molnár J, Szakács G, Tusnády GE.

PLoS One. 2016 Mar 17;11(3):e0151760. doi: 10.1371/journal.pone.0151760. eCollection 2016.

8.
9.

Computational Prediction of Effector Proteins in Fungi: Opportunities and Challenges.

Sonah H, Deshmukh RK, Bélanger RR.

Front Plant Sci. 2016 Feb 12;7:126. doi: 10.3389/fpls.2016.00126. eCollection 2016. Review.

10.

Genome of the facultative scuticociliatosis pathogen Pseudocohnilembus persalinus provides insight into its virulence through horizontal gene transfer.

Xiong J, Wang G, Cheng J, Tian M, Pan X, Warren A, Jiang C, Yuan D, Miao W.

Sci Rep. 2015 Oct 21;5:15470. doi: 10.1038/srep15470.

11.

Genome-Wide Architecture of Disease Resistance Genes in Lettuce.

Christopoulou M, Wo SR, Kozik A, McHale LK, Truco MJ, Wroblewski T, Michelmore RW.

G3 (Bethesda). 2015 Oct 8;5(12):2655-69. doi: 10.1534/g3.115.020818. Erratum in: G3 (Bethesda). 2016 Mar;6(3):773.

12.

The Regulatory Domain of Squalene Monooxygenase Contains a Re-entrant Loop and Senses Cholesterol via a Conformational Change.

Howe V, Chua NK, Stevenson J, Brown AJ.

J Biol Chem. 2015 Nov 13;290(46):27533-44. doi: 10.1074/jbc.M115.675181. Epub 2015 Oct 3.

13.

Transmembrane helices in "classical" nuclear reproductive steroid receptors: a perspective.

Morrill GA, Kostellow AB, Gupta RK.

Nucl Recept Signal. 2015 Jul 21;13:e003. doi: 10.1621/nrs.13003. eCollection 2015.

14.

Membrane Protein Properties Revealed through Data-Rich Electrostatics Calculations.

Marcoline FV, Bethel N, Guerriero CJ, Brodsky JL, Grabe M.

Structure. 2015 Aug 4;23(8):1526-37. doi: 10.1016/j.str.2015.05.014. Epub 2015 Jun 25.

15.

Design and evaluation of antimalarial peptides derived from prediction of short linear motifs in proteins related to erythrocyte invasion.

Bianchin A, Bell A, Chubb AJ, Doolan N, Leneghan D, Stavropoulos I, Shields DC, Mooney C.

PLoS One. 2015 Jun 3;10(6):e0127383. doi: 10.1371/journal.pone.0127383. eCollection 2015.

16.

The human transmembrane proteome.

Dobson L, Reményi I, Tusnády GE.

Biol Direct. 2015 May 28;10:31. doi: 10.1186/s13062-015-0061-x.

17.

The TOPCONS web server for consensus prediction of membrane protein topology and signal peptides.

Tsirigos KD, Peters C, Shu N, Käll L, Elofsson A.

Nucleic Acids Res. 2015 Jul 1;43(W1):W401-7. doi: 10.1093/nar/gkv485. Epub 2015 May 12.

18.

CCTOP: a Consensus Constrained TOPology prediction web server.

Dobson L, Reményi I, Tusnády GE.

Nucleic Acids Res. 2015 Jul 1;43(W1):W408-12. doi: 10.1093/nar/gkv451. Epub 2015 May 5.

19.

An atlas of mouse CD4(+) T cell transcriptomes.

Stubbington MJ, Mahata B, Svensson V, Deonarine A, Nissen JK, Betz AG, Teichmann SA.

Biol Direct. 2015 Apr 3;10:14. doi: 10.1186/s13062-015-0045-x.

20.

Engineered biosynthesis of enduracidin lipoglycopeptide antibiotics using the ramoplanin mannosyltransferase Ram29.

Wu MC, Styles MQ, Law BJ, Struck AW, Nunns L, Micklefield J.

Microbiology. 2015 Jul;161(7):1338-47. doi: 10.1099/mic.0.000095. Epub 2015 Apr 15.

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