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Items: 1 to 20 of 28


Catabolism of the Last Two Steroid Rings in Mycobacterium tuberculosis and Other Bacteria.

Crowe AM, Casabon I, Brown KL, Liu J, Lian J, Rogalski JC, Hurst TE, Snieckus V, Foster LJ, Eltis LD.

MBio. 2017 Apr 4;8(2). pii: e00321-17. doi: 10.1128/mBio.00321-17.


CO synthesized from the central one-carbon pool as source for the iron carbonyl in O2-tolerant [NiFe]-hydrogenase.

Bürstel I, Siebert E, Frielingsdorf S, Zebger I, Friedrich B, Lenz O.

Proc Natl Acad Sci U S A. 2016 Dec 20;113(51):14722-14726. doi: 10.1073/pnas.1614656113. Epub 2016 Dec 5.


Vibrational Stark Effects of Carbonyl Probes Applied to Reinterpret IR and Raman Data for Enzyme Inhibitors in Terms of Electric Fields at the Active Site.

Schneider SH, Boxer SG.

J Phys Chem B. 2016 Sep 15;120(36):9672-84. doi: 10.1021/acs.jpcb.6b08133. Epub 2016 Aug 31.


Promiscuous Diffusible Signal Factor Production and Responsiveness of the Xylella fastidiosa Rpf System.

Ionescu M, Yokota K, Antonova E, Garcia A, Beaulieu E, Hayes T, Iavarone AT, Lindow SE.

MBio. 2016 Jul 19;7(4). pii: e01054-16. doi: 10.1128/mBio.01054-16.


The Phormidolide Biosynthetic Gene Cluster: A trans-AT PKS Pathway Encoding a Toxic Macrocyclic Polyketide.

Bertin MJ, Vulpanovici A, Monroe EA, Korobeynikov A, Sherman DH, Gerwick L, Gerwick WH.

Chembiochem. 2016 Jan;17(2):164-73. doi: 10.1002/cbic.201500467. Epub 2015 Dec 23.


Structural Organization of Enzymes of the Phenylacetate Catabolic Hybrid Pathway.

Grishin AM, Cygler M.

Biology (Basel). 2015 Jun 12;4(2):424-42. doi: 10.3390/biology4020424. Review.


Biochemical functional predictions for protein structures of unknown or uncertain function.

Mills CL, Beuning PJ, Ondrechen MJ.

Comput Struct Biotechnol J. 2015 Feb 18;13:182-91. doi: 10.1016/j.csbj.2015.02.003. eCollection 2015. Review.


ComPPI: a cellular compartment-specific database for protein-protein interaction network analysis.

Veres DV, Gyurkó DM, Thaler B, Szalay KZ, Fazekas D, Korcsmáros T, Csermely P.

Nucleic Acids Res. 2015 Jan;43(Database issue):D485-93. doi: 10.1093/nar/gku1007. Epub 2014 Oct 27.


Identification and characterization of the carbapenem MM 4550 and its gene cluster in Streptomyces argenteolus ATCC 11009.

Li R, Lloyd EP, Moshos KA, Townsend CA.

Chembiochem. 2014 Jan 24;15(2):320-31. doi: 10.1002/cbic.201300319. Epub 2014 Jan 13.


The cold-induced two-component system CBO0366/CBO0365 regulates metabolic pathways with novel roles in group I Clostridium botulinum ATCC 3502 cold tolerance.

Dahlsten E, Zhang Z, Somervuo P, Minton NP, Lindström M, Korkeala H.

Appl Environ Microbiol. 2014 Jan;80(1):306-19. doi: 10.1128/AEM.03173-13. Epub 2013 Oct 25.


Frontiers, opportunities, and challenges in biochemical and chemical catalysis of CO2 fixation.

Appel AM, Bercaw JE, Bocarsly AB, Dobbek H, DuBois DL, Dupuis M, Ferry JG, Fujita E, Hille R, Kenis PJ, Kerfeld CA, Morris RH, Peden CH, Portis AR, Ragsdale SW, Rauchfuss TB, Reek JN, Seefeldt LC, Thauer RK, Waldrop GL.

Chem Rev. 2013 Aug 14;113(8):6621-58. doi: 10.1021/cr300463y. Epub 2013 Jun 14. Review. No abstract available.


Crystal structure of DmdD, a crotonase superfamily enzyme that catalyzes the hydration and hydrolysis of methylthioacryloyl-CoA.

Tan D, Crabb WM, Whitman WB, Tong L.

PLoS One. 2013 May 21;8(5):e63870. doi: 10.1371/journal.pone.0063870. Print 2013.


Structural basis of the induced-fit mechanism of 1,4-dihydroxy-2-naphthoyl coenzyme A synthase from the crotonase fold superfamily.

Sun Y, Song H, Li J, Li Y, Jiang M, Zhou J, Guo Z.

PLoS One. 2013 Apr 26;8(4):e63095. doi: 10.1371/journal.pone.0063095. Print 2013.


Fundamental challenges in mechanistic enzymology: progress toward understanding the rate enhancements of enzymes.

Herschlag D, Natarajan A.

Biochemistry. 2013 Mar 26;52(12):2050-67. doi: 10.1021/bi4000113. Epub 2013 Mar 14. Review.


The enzymes of biotin dependent CO₂ metabolism: what structures reveal about their reaction mechanisms.

Waldrop GL, Holden HM, St Maurice M.

Protein Sci. 2012 Nov;21(11):1597-619. doi: 10.1002/pro.2156. Review.


Protein-protein interactions in the β-oxidation part of the phenylacetate utilization pathway: crystal structure of the PaaF-PaaG hydratase-isomerase complex.

Grishin AM, Ajamian E, Zhang L, Rouiller I, Bostina M, Cygler M.

J Biol Chem. 2012 Nov 2;287(45):37986-96. doi: 10.1074/jbc.M112.388231. Epub 2012 Sep 7.


The Burkholderia cenocepacia BDSF quorum sensing fatty acid is synthesized by a bifunctional crotonase homologue having both dehydratase and thioesterase activities.

Bi H, Christensen QH, Feng Y, Wang H, Cronan JE.

Mol Microbiol. 2012 Feb;83(4):840-55. doi: 10.1111/j.1365-2958.2012.07968.x. Epub 2012 Jan 29.


Epigenetic virtues of chromodomains.

Blus BJ, Wiggins K, Khorasanizadeh S.

Crit Rev Biochem Mol Biol. 2011 Dec;46(6):507-26. doi: 10.3109/10409238.2011.619164. Epub 2011 Oct 25. Review.


Ethylmalonyl-CoA decarboxylase, a new enzyme involved in metabolite proofreading.

Linster CL, Noël G, Stroobant V, Vertommen D, Vincent MF, Bommer GT, Veiga-da-Cunha M, Van Schaftingen E.

J Biol Chem. 2011 Dec 16;286(50):42992-3003. doi: 10.1074/jbc.M111.281527. Epub 2011 Oct 20.


Definition of the common and divergent steps in carbapenem β-lactam antibiotic biosynthesis.

Bodner MJ, Li R, Phelan RM, Freeman MF, Moshos KA, Lloyd EP, Townsend CA.

Chembiochem. 2011 Sep 19;12(14):2159-65. doi: 10.1002/cbic.201100366. Epub 2011 Aug 24.

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