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Items: 1 to 20 of 63

1.

Design and application of a target capture sequencing of exons and conserved non-coding sequences for the rat.

Yoshihara M, Saito D, Sato T, Ohara O, Kuramoto T, Suyama M.

BMC Genomics. 2016 Aug 9;17:593. doi: 10.1186/s12864-016-2975-9.

2.

Wars2 is a determinant of angiogenesis.

Wang M, Sips P, Khin E, Rotival M, Sun X, Ahmed R, Widjaja AA, Schafer S, Yusoff P, Choksi PK, Ko NS, Singh MK, Epstein D, Guan Y, Houštěk J, Mracek T, Nuskova H, Mikell B, Tan J, Pesce F, Kolar F, Bottolo L, Mancini M, Hubner N, Pravenec M, Petretto E, MacRae C, Cook SA.

Nat Commun. 2016 Jul 8;7:12061. doi: 10.1038/ncomms12061.

3.

Whole-Genome Sequencing Reveals Genetic Variation in the Asian House Rat.

Teng H, Zhang Y, Shi C, Mao F, Hou L, Guo H, Sun Z, Zhang J.

G3 (Bethesda). 2016 Jul 7;6(7):1969-77. doi: 10.1534/g3.116.029504.

4.

Epithelial sodium channel (ENaC) family: Phylogeny, structure-function, tissue distribution, and associated inherited diseases.

Hanukoglu I, Hanukoglu A.

Gene. 2016 Apr 1;579(2):95-132. doi: 10.1016/j.gene.2015.12.061. Epub 2016 Jan 7. Review.

5.

Comparative Transcriptomes and EVO-DEVO Studies Depending on Next Generation Sequencing.

Liu T, Yu L, Liu L, Li H, Li Y.

Comput Math Methods Med. 2015;2015:896176. doi: 10.1155/2015/896176. Epub 2015 Oct 12. Review.

6.

Chemically Induced Oncogenesis in the Peripheral Nervous System Is Suppressed in Congenic BDIX.BDIV-Mss1 and -Mss7 Rats.

Koelsch B, van den Berg L, Fischer C, Winzen-Reichert B, Kutritz A, Kindler-Röhrborn A.

G3 (Bethesda). 2015 Nov 3;6(1):59-65. doi: 10.1534/g3.115.021170.

7.

Comparative Genome of GK and Wistar Rats Reveals Genetic Basis of Type 2 Diabetes.

Liu T, Li H, Ding G, Wang Z, Chen Y, Liu L, Li Y, Li Y.

PLoS One. 2015 Nov 3;10(11):e0141859. doi: 10.1371/journal.pone.0141859. eCollection 2015.

8.

The sequenced rat brain transcriptome--its use in identifying networks predisposing alcohol consumption.

Saba LM, Flink SC, Vanderlinden LA, Israel Y, Tampier L, Colombo G, Kiianmaa K, Bell RL, Printz MP, Flodman P, Koob G, Richardson HN, Lombardo J, Hoffman PL, Tabakoff B.

FEBS J. 2015 Sep;282(18):3556-78. doi: 10.1111/febs.13358. Epub 2015 Jul 16.

9.

Genomes and phenomes of a population of outbred rats and its progenitors.

Baud A, Guryev V, Hummel O, Johannesson M; Rat Genome Sequencing and Mapping Consortium, Flint J.

Sci Data. 2014 Jun 10;1:140011. doi: 10.1038/sdata.2014.11. eCollection 2014. Erratum in: Sci Data. 2014;1:140016.

10.

Hcn1 is a tremorgenic genetic component in a rat model of essential tremor.

Ohno Y, Shimizu S, Tatara A, Imaoku T, Ishii T, Sasa M, Serikawa T, Kuramoto T.

PLoS One. 2015 May 13;10(5):e0123529. doi: 10.1371/journal.pone.0123529. eCollection 2015.

11.

Genomic landscape of rat strain and substrain variation.

Hermsen R, de Ligt J, Spee W, Blokzijl F, Schäfer S, Adami E, Boymans S, Flink S, van Boxtel R, van der Weide RH, Aitman T, Hübner N, Simonis M, Tabakoff B, Guryev V, Cuppen E.

BMC Genomics. 2015 May 6;16:357. doi: 10.1186/s12864-015-1594-1.

12.

Systems biology with high-throughput sequencing reveals genetic mechanisms underlying the metabolic syndrome in the Lyon hypertensive rat.

Wang J, Ma MC, Mennie AK, Pettus JM, Xu Y, Lin L, Traxler MG, Jakoubek J, Atanur SS, Aitman TJ, Xing Y, Kwitek AE.

Circ Cardiovasc Genet. 2015 Apr;8(2):316-26. doi: 10.1161/CIRCGENETICS.114.000520. Epub 2015 Jan 8.

13.

Genetic analysis of the cardiac methylome at single nucleotide resolution in a model of human cardiovascular disease.

Johnson MD, Mueller M, Adamowicz-Brice M, Collins MJ, Gellert P, Maratou K, Srivastava PK, Rotival M, Butt S, Game L, Atanur SS, Silver N, Norsworthy PJ, Langley SR, Petretto E, Pravenec M, Aitman TJ.

PLoS Genet. 2014 Dec 4;10(12):e1004813. doi: 10.1371/journal.pgen.1004813. eCollection 2014 Dec.

14.

Advances on genetic rat models of epilepsy.

Serikawa T, Mashimo T, Kuramoro T, Voigt B, Ohno Y, Sasa M.

Exp Anim. 2015;64(1):1-7. doi: 10.1538/expanim.14-0066. Epub 2014 Oct 14. Review.

15.

Genomic determinants of triglyceride and cholesterol distribution into lipoprotein fractions in the rat.

Hodúlová M, Šedová L, Křenová D, Liška F, Krupková M, Kazdová L, Tremblay J, Hamet P, Křen V, Šeda O.

PLoS One. 2014 Oct 8;9(10):e109983. doi: 10.1371/journal.pone.0109983. eCollection 2014.

16.

Identification of a novel gene for diabetic traits in rats, mice, and humans.

Tsaih SW, Holl K, Jia S, Kaldunski M, Tschannen M, He H, Andrae JW, Li SH, Stoddard A, Wiederhold A, Parrington J, Ruas da Silva M, Galione A, Meigs J; Meta-Analyses of Glucose and Insulin-Related Traits Consortium (MAGIC) Investigators, Hoffmann RG, Simpson P, Jacob H, Hessner M, Solberg Woods LC.

Genetics. 2014 Sep;198(1):17-29. doi: 10.1534/genetics.114.162982.

17.

Variation block-based genomics method for crop plants.

Kim YH, Park HM, Hwang TY, Lee SK, Choi MS, Jho S, Hwang S, Kim HM, Lee D, Kim BC, Hong CP, Cho YS, Kim H, Jeong KH, Seo MJ, Yun HT, Kim SL, Kwon YU, Kim WH, Chun HK, Lim SJ, Shin YA, Choi IY, Kim YS, Yoon HS, Lee SH, Lee S.

BMC Genomics. 2014 Jun 15;15:477. doi: 10.1186/1471-2164-15-477.

18.

Identification of candidate risk gene variations by whole-genome sequence analysis of four rat strains commonly used in inflammation research.

Bäckdahl L, Ekman D, Jagodic M, Olsson T, Holmdahl R.

BMC Genomics. 2014 May 21;15:391. doi: 10.1186/1471-2164-15-391.

19.

Natural variation of histone modification and its impact on gene expression in the rat genome.

Rintisch C, Heinig M, Bauerfeind A, Schafer S, Mieth C, Patone G, Hummel O, Chen W, Cook S, Cuppen E, Colomé-Tatché M, Johannes F, Jansen RC, Neil H, Werner M, Pravenec M, Vingron M, Hubner N.

Genome Res. 2014 Jun;24(6):942-53. doi: 10.1101/gr.169029.113. Epub 2014 May 2.

20.

Genomic structure of nucleotide diversity among Lyon rat models of metabolic syndrome.

Ma MC, Atanur SS, Aitman TJ, Kwitek AE.

BMC Genomics. 2014 Mar 14;15:197. doi: 10.1186/1471-2164-15-197.

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