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Items: 1 to 20 of 107

1.

APOBEC3G-Mediated G-to-A Hypermutation of the HIV-1 Genome: The Missing Link in Antiviral Molecular Mechanisms.

Okada A, Iwatani Y.

Front Microbiol. 2016 Dec 19;7:2027. doi: 10.3389/fmicb.2016.02027. eCollection 2016 Dec 19. Review.

2.

Structural basis for targeted DNA cytosine deamination and mutagenesis by APOBEC3A and APOBEC3B.

Shi K, Carpenter MA, Banerjee S, Shaban NM, Kurahashi K, Salamango DJ, McCann JL, Starrett GJ, Duffy JV, Demir Ö, Amaro RE, Harki DA, Harris RS, Aihara H.

Nat Struct Mol Biol. 2017 Feb;24(2):131-139. doi: 10.1038/nsmb.3344. Epub 2016 Dec 19.

PMID:
27991903
3.

RNA Editing-Systemic Relevance and Clue to Disease Mechanisms?

Meier JC, Kankowski S, Krestel H, Hetsch F.

Front Mol Neurosci. 2016 Nov 23;9:124. eCollection 2016 Nov 23. Review.

4.

Rad51 and RecA juxtapose dsDNA ends ready for DNA ligase-catalyzed end-joining under recombinase-suppressive conditions.

Konomura N, Arai N, Shinohara T, Kobayashi J, Iwasaki W, Ikawa S, Kusano K, Shibata T.

Nucleic Acids Res. 2017 Jan 9;45(1):337-352. doi: 10.1093/nar/gkw998. Epub 2016 Oct 27.

5.

Crystal structures of APOBEC3G N-domain alone and its complex with DNA.

Xiao X, Li SX, Yang H, Chen XS.

Nat Commun. 2016 Aug 2;7:12193. doi: 10.1038/ncomms12193.

6.

The APOBEC Protein Family: United by Structure, Divergent in Function.

Salter JD, Bennett RP, Smith HC.

Trends Biochem Sci. 2016 Jul;41(7):578-94. doi: 10.1016/j.tibs.2016.05.001. Epub 2016 Jun 6. Review.

PMID:
27283515
7.

Structural analysis of the activation-induced deoxycytidine deaminase required in immunoglobulin diversification.

Pham P, Afif SA, Shimoda M, Maeda K, Sakaguchi N, Pedersen LC, Goodman MF.

DNA Repair (Amst). 2016 Jul;43:48-56. doi: 10.1016/j.dnarep.2016.05.029. Epub 2016 May 13.

PMID:
27258794
8.
9.

Nuclear Magnetic Resonance Structure of the APOBEC3B Catalytic Domain: Structural Basis for Substrate Binding and DNA Deaminase Activity.

Byeon IJ, Byeon CH, Wu T, Mitra M, Singer D, Levin JG, Gronenborn AM.

Biochemistry. 2016 May 31;55(21):2944-59. doi: 10.1021/acs.biochem.6b00382. Epub 2016 May 19.

PMID:
27163633
10.

1.92 Angstrom Zinc-Free APOBEC3F Catalytic Domain Crystal Structure.

Shaban NM, Shi K, Li M, Aihara H, Harris RS.

J Mol Biol. 2016 Jun 5;428(11):2307-16. doi: 10.1016/j.jmb.2016.04.026. Epub 2016 Apr 30.

PMID:
27139641
11.

Structural and functional assessment of APOBEC3G macromolecular complexes.

Polevoda B, McDougall WM, Bennett RP, Salter JD, Smith HC.

Methods. 2016 Sep 1;107:10-22. doi: 10.1016/j.ymeth.2016.03.006. Epub 2016 Mar 14.

PMID:
26988126
12.

APOBEC3G Interacts with ssDNA by Two Modes: AFM Studies.

Shlyakhtenko LS, Dutta S, Banga J, Li M, Harris RS, Lyubchenko YL.

Sci Rep. 2015 Oct 27;5:15648. doi: 10.1038/srep15648.

13.

RNA binding to APOBEC3G induces the disassembly of functional deaminase complexes by displacing single-stranded DNA substrates.

Polevoda B, McDougall WM, Tun BN, Cheung M, Salter JD, Friedman AE, Smith HC.

Nucleic Acids Res. 2015 Oct 30;43(19):9434-45. doi: 10.1093/nar/gkv970. Epub 2015 Sep 30.

14.

Crystal Structure of the DNA Deaminase APOBEC3B Catalytic Domain.

Shi K, Carpenter MA, Kurahashi K, Harris RS, Aihara H.

J Biol Chem. 2015 Nov 20;290(47):28120-30. doi: 10.1074/jbc.M115.679951. Epub 2015 Sep 28.

15.

Characterization of the Catalytic Domain of Human APOBEC3B and the Critical Structural Role for a Conserved Methionine.

Siriwardena SU, Guruge TA, Bhagwat AS.

J Mol Biol. 2015 Sep 25;427(19):3042-55. doi: 10.1016/j.jmb.2015.08.006. Epub 2015 Aug 14.

16.

Structure of the Vif-binding domain of the antiviral enzyme APOBEC3G.

Kouno T, Luengas EM, Shigematsu M, Shandilya SM, Zhang J, Chen L, Hara M, Schiffer CA, Harris RS, Matsuo H.

Nat Struct Mol Biol. 2015 Jun;22(6):485-91. doi: 10.1038/nsmb.3033. Epub 2015 May 18.

17.

The ssDNA Mutator APOBEC3A Is Regulated by Cooperative Dimerization.

Bohn MF, Shandilya SM, Silvas TV, Nalivaika EA, Kouno T, Kelch BA, Ryder SP, Kurt-Yilmaz N, Somasundaran M, Schiffer CA.

Structure. 2015 May 5;23(5):903-11. doi: 10.1016/j.str.2015.03.016. Epub 2015 Apr 23.

18.

Catalytic analysis of APOBEC3G involving real-time NMR spectroscopy reveals nucleic acid determinants for deamination.

Kamba K, Nagata T, Katahira M.

PLoS One. 2015 Apr 13;10(4):e0124142. doi: 10.1371/journal.pone.0124142. eCollection 2015 Apr 13.

19.

APOBECs and virus restriction.

Harris RS, Dudley JP.

Virology. 2015 May;479-480:131-45. doi: 10.1016/j.virol.2015.03.012. Epub 2015 Mar 26. Review.

20.

Sequence and structural determinants of human APOBEC3H deaminase and anti-HIV-1 activities.

Mitra M, Singer D, Mano Y, Hritz J, Nam G, Gorelick RJ, Byeon IJ, Gronenborn AM, Iwatani Y, Levin JG.

Retrovirology. 2015 Jan 22;12:3. doi: 10.1186/s12977-014-0130-8.

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