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Items: 17


Tissue enrichment analysis for C. elegans genomics.

Angeles-Albores D, N Lee RY, Chan J, Sternberg PW.

BMC Bioinformatics. 2016 Sep 13;17(1):366. doi: 10.1186/s12859-016-1229-9.


Homeodomain-Interacting Protein Kinase (HPK-1) regulates stress responses and ageing in C. elegans.

Berber S, Wood M, Llamosas E, Thaivalappil P, Lee K, Liao BM, Chew YL, Rhodes A, Yucel D, Crossley M, Nicholas HR.

Sci Rep. 2016 Jan 21;6:19582. doi: 10.1038/srep19582.


CSR-1 and P granules suppress sperm-specific transcription in the C. elegans germline.

Campbell AC, Updike DL.

Development. 2015 May 15;142(10):1745-55. doi: 10.1242/dev.121434.


Conserved RNA-binding proteins required for dendrite morphogenesis in Caenorhabditis elegans sensory neurons.

Antonacci S, Forand D, Wolf M, Tyus C, Barney J, Kellogg L, Simon MA, Kerr G, Wells KL, Younes S, Mortimer NT, Olesnicky EC, Killian DJ.

G3 (Bethesda). 2015 Feb 10;5(4):639-53. doi: 10.1534/g3.115.017327.


Isolation of specific neurons from C. elegans larvae for gene expression profiling.

Spencer WC, McWhirter R, Miller T, Strasbourger P, Thompson O, Hillier LW, Waterston RH, Miller DM 3rd.

PLoS One. 2014 Nov 5;9(11):e112102. doi: 10.1371/journal.pone.0112102.


Sensory neuron fates are distinguished by a transcriptional switch that regulates dendrite branch stabilization.

Smith CJ, O'Brien T, Chatzigeorgiou M, Spencer WC, Feingold-Link E, Husson SJ, Hori S, Mitani S, Gottschalk A, Schafer WR, Miller DM 3rd.

Neuron. 2013 Jul 24;79(2):266-80. doi: 10.1016/j.neuron.2013.05.009.


Evaluation of sex-specific gene expression in archived dried blood spots (DBS).

Resau JH, Ho NT, Dykema K, Faber MS, Busik JV, Nickolov RZ, Furge KA, Paneth N, Jewell S, Khoo SK.

Int J Mol Sci. 2012;13(8):9599-608. doi: 10.3390/ijms13089599.


Optogenetic analysis of a nociceptor neuron and network reveals ion channels acting downstream of primary sensors.

Husson SJ, Costa WS, Wabnig S, Stirman JN, Watson JD, Spencer WC, Akerboom J, Looger LL, Treinin M, Miller DM 3rd, Lu H, Gottschalk A.

Curr Biol. 2012 May 8;22(9):743-52. doi: 10.1016/j.cub.2012.02.066.


Netrin (UNC-6) mediates dendritic self-avoidance.

Smith CJ, Watson JD, VanHoven MK, Colón-Ramos DA, Miller DM 3rd.

Nat Neurosci. 2012 Mar 18;15(5):731-7. doi: 10.1038/nn.3065.


C. elegans multi-dendritic sensory neurons: morphology and function.

Albeg A, Smith CJ, Chatzigeorgiou M, Feitelson DG, Hall DH, Schafer WR, Miller DM 3rd, Treinin M.

Mol Cell Neurosci. 2011 Jan;46(1):308-17. doi: 10.1016/j.mcn.2010.10.001.


ETS-4 is a transcriptional regulator of life span in Caenorhabditis elegans.

Thyagarajan B, Blaszczak AG, Chandler KJ, Watts JL, Johnson WE, Graves BJ.

PLoS Genet. 2010 Sep 16;6(9):e1001125. doi: 10.1371/journal.pgen.1001125.


Time-lapse imaging and cell-specific expression profiling reveal dynamic branching and molecular determinants of a multi-dendritic nociceptor in C. elegans.

Smith CJ, Watson JD, Spencer WC, O'Brien T, Cha B, Albeg A, Treinin M, Miller DM 3rd.

Dev Biol. 2010 Sep 1;345(1):18-33. doi: 10.1016/j.ydbio.2010.05.502.


Specific roles for DEG/ENaC and TRP channels in touch and thermosensation in C. elegans nociceptors.

Chatzigeorgiou M, Yoo S, Watson JD, Lee WH, Spencer WC, Kindt KS, Hwang SW, Miller DM 3rd, Treinin M, Driscoll M, Schafer WR.

Nat Neurosci. 2010 Jul;13(7):861-8. doi: 10.1038/nn.2581.


Cell sorting-assisted microarray profiling of host cell response to Cryptosporidium parvum infection.

Yang YL, Buck GA, Widmer G.

Infect Immun. 2010 Mar;78(3):1040-8. doi: 10.1128/IAI.01009-09.


GExplore: a web server for integrated queries of protein domains, gene expression and mutant phenotypes.

Hutter H, Ng MP, Chen N.

BMC Genomics. 2009 Nov 16;10:529. doi: 10.1186/1471-2164-10-529.


Evaluation of methods for amplification of picogram amounts of total RNA for whole genome expression profiling.

Clément-Ziza M, Gentien D, Lyonnet S, Thiery JP, Besmond C, Decraene C.

BMC Genomics. 2009 May 26;10:246. doi: 10.1186/1471-2164-10-246.


Characterization of the effects of methylmercury on Caenorhabditis elegans.

Helmcke KJ, Syversen T, Miller DM 3rd, Aschner M.

Toxicol Appl Pharmacol. 2009 Oct 15;240(2):265-72. doi: 10.1016/j.taap.2009.03.013.

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