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Items: 1 to 20 of 24

1.

The sncRNA Zoo: a repository for circulating small noncoding RNAs in animals.

Fehlmann T, Backes C, Pirritano M, Laufer T, Galata V, Kern F, Kahraman M, Gasparoni G, Ludwig N, Lenhof HP, Gregersen HA, Francke R, Meese E, Simon M, Keller A.

Nucleic Acids Res. 2019 May 21;47(9):4431-4441. doi: 10.1093/nar/gkz227.

2.

Association of Copy Number Variation at Intron 3 of HMGA2 With Navel Length in Bos indicus.

Aguiar TS, Torrecilha RBP, Milanesi M, Utsunomiya ATH, Trigo BB, Tijjani A, Musa HH, Lopes FL, Ajmone-Marsan P, Carvalheiro R, Neves HHR, do Carmo AS, Hanotte O, Sonstegard TS, Garcia JF, Utsunomiya YT.

Front Genet. 2018 Dec 7;9:627. doi: 10.3389/fgene.2018.00627. eCollection 2018.

3.

Clinical value of miR-182-5p in lung squamous cell carcinoma: a study combining data from TCGA, GEO, and RT-qPCR validation.

Luo J, Shi K, Yin SY, Tang RX, Chen WJ, Huang LZ, Gan TQ, Cai ZW, Chen G.

World J Surg Oncol. 2018 Apr 10;16(1):76. doi: 10.1186/s12957-018-1378-6.

4.

The Identification of Circulating MiRNA in Bovine Serum and Their Potential as Novel Biomarkers of Early Mycobacterium avium subsp paratuberculosis Infection.

Farrell D, Shaughnessy RG, Britton L, MacHugh DE, Markey B, Gordon SV.

PLoS One. 2015 Jul 28;10(7):e0134310. doi: 10.1371/journal.pone.0134310. eCollection 2015.

5.
6.

Rule discovery and distance separation to detect reliable miRNA biomarkers for the diagnosis of lung squamous cell carcinoma.

Song R, Liu Q, Hutvagner G, Nguyen H, Ramamohanarao K, Wong L, Li J.

BMC Genomics. 2014;15 Suppl 9:S16. doi: 10.1186/1471-2164-15-S9-S16. Epub 2014 Dec 8.

7.

ptRNApred: computational identification and classification of post-transcriptional RNA.

Gupta Y, Witte M, Möller S, Ludwig RJ, Restle T, Zillikens D, Ibrahim SM.

Nucleic Acids Res. 2014 Dec 16;42(22):e167. doi: 10.1093/nar/gku918. Epub 2014 Oct 10.

8.

Comparative transcriptome analysis reveals significant differences in MicroRNA expression and their target genes between adipose and muscular tissues in cattle.

Sun J, Zhang B, Lan X, Zhang C, Lei C, Chen H.

PLoS One. 2014 Jul 9;9(7):e102142. doi: 10.1371/journal.pone.0102142. eCollection 2014.

9.

Studying the system-level involvement of microRNAs in Parkinson's disease.

Chatterjee P, Bhattacharyya M, Bandyopadhyay S, Roy D.

PLoS One. 2014 Apr 1;9(4):e93751. doi: 10.1371/journal.pone.0093751. eCollection 2014.

10.

Identification of novel microRNAs in primates by using the synteny information and small RNA deep sequencing data.

Yuan Z, Liu H, Nie Y, Ding S, Yan M, Tan S, Jin Y, Sun X.

Int J Mol Sci. 2013 Oct 16;14(10):20820-32. doi: 10.3390/ijms141020820.

11.

Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters.

Uva P, Da Sacco L, Del Cornò M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A.

RNA. 2013 Mar;19(3):365-79. doi: 10.1261/rna.035394.112. Epub 2013 Jan 17.

12.

Modeling the role of peroxisome proliferator-activated receptor γ and microRNA-146 in mucosal immune responses to Clostridium difficile.

Viladomiu M, Hontecillas R, Pedragosa M, Carbo A, Hoops S, Michalak P, Michalak K, Guerrant RL, Roche JK, Warren CA, Bassaganya-Riera J.

PLoS One. 2012;7(10):e47525. doi: 10.1371/journal.pone.0047525. Epub 2012 Oct 11.

13.

miRNA regulation of gene expression: a predictive bioinformatics analysis in the postnatally developing monkey hippocampus.

Favre G, Banta Lavenex P, Lavenex P.

PLoS One. 2012;7(8):e43435. doi: 10.1371/journal.pone.0043435. Epub 2012 Aug 28.

14.

miREvo: an integrative microRNA evolutionary analysis platform for next-generation sequencing experiments.

Wen M, Shen Y, Shi S, Tang T.

BMC Bioinformatics. 2012 Jun 21;13:140. doi: 10.1186/1471-2105-13-140.

15.

miRviewer: a multispecies microRNA homologous viewer.

Kiezun A, Artzi S, Modai S, Volk N, Isakov O, Shomron N.

BMC Res Notes. 2012 Feb 13;5:92. doi: 10.1186/1756-0500-5-92.

16.

MiRPara: a SVM-based software tool for prediction of most probable microRNA coding regions in genome scale sequences.

Wu Y, Wei B, Liu H, Li T, Rayner S.

BMC Bioinformatics. 2011 Apr 19;12:107. doi: 10.1186/1471-2105-12-107.

17.

Identification of Schistosoma mansoni microRNAs.

Simões MC, Lee J, Djikeng A, Cerqueira GC, Zerlotini A, da Silva-Pereira RA, Dalby AR, LoVerde P, El-Sayed NM, Oliveira G.

BMC Genomics. 2011 Jan 19;12:47. doi: 10.1186/1471-2164-12-47.

18.

Discovery and characterization of medaka miRNA genes by next generation sequencing platform.

Li SC, Chan WC, Ho MR, Tsai KW, Hu LY, Lai CH, Hsu CN, Hwang PP, Lin WC.

BMC Genomics. 2010 Dec 2;11 Suppl 4:S8. doi: 10.1186/1471-2164-11-S4-S8.

19.

A framework for automated enrichment of functionally significant inverted repeats in whole genomes.

Kandoth C, Ercal F, Frank RL.

BMC Bioinformatics. 2010 Oct 7;11 Suppl 6:S20. doi: 10.1186/1471-2105-11-S6-S20.

20.

Large-scale expression analysis reveals distinct microRNA profiles at different stages of human neurodevelopment.

Smith B, Treadwell J, Zhang D, Ly D, McKinnell I, Walker PR, Sikorska M.

PLoS One. 2010 Jun 15;5(6):e11109. doi: 10.1371/journal.pone.0011109.

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