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Items: 1 to 20 of 34

1.

Stress-induced transposon reactivation: a mediator or an estimator of allostatic load?

N├Ątt D, Thorsell A.

Environ Epigenet. 2016 Aug 27;2(3):dvw015. doi: 10.1093/eep/dvw015. eCollection 2016 Aug. Review.

2.

Effective computational detection of piRNAs using n-gram models and support vector machine.

Chen CC, Qian X, Yoon BJ.

BMC Bioinformatics. 2017 Dec 28;18(Suppl 14):517. doi: 10.1186/s12859-017-1896-1.

3.

IpiRId: Integrative approach for piRNA prediction using genomic and epigenomic data.

Boucheham A, Sommard V, Zehraoui F, Boualem A, Batouche M, Bendahmane A, Israeli D, Tahi F.

PLoS One. 2017 Jun 16;12(6):e0179787. doi: 10.1371/journal.pone.0179787. eCollection 2017.

4.

A Review on Recent Computational Methods for Predicting Noncoding RNAs.

Zhang Y, Huang H, Zhang D, Qiu J, Yang J, Wang K, Zhu L, Fan J, Yang J.

Biomed Res Int. 2017;2017:9139504. doi: 10.1155/2017/9139504. Epub 2017 May 3. Review.

5.

Developmental piRNA profiles of the invasive vector mosquito Aedes albopictus.

Liu P, Dong Y, Gu J, Puthiyakunnon S, Wu Y, Chen XG.

Parasit Vectors. 2016 Sep 29;9(1):524.

6.

A genetic algorithm-based weighted ensemble method for predicting transposon-derived piRNAs.

Li D, Luo L, Zhang W, Liu F, Luo F.

BMC Bioinformatics. 2016 Aug 31;17(1):329. doi: 10.1186/s12859-016-1206-3.

7.

qiRNApredictor: A Novel Computational Program for the Prediction of qiRNAs in Neurospora crassa.

Deng H, Liu Q, Cao W, Gui R, Ma C, Yi M, Yao Y.

PLoS One. 2016 Jul 18;11(7):e0159487. doi: 10.1371/journal.pone.0159487. eCollection 2016.

8.

Characterization of piRNAs across postnatal development in mouse brain.

Ghosheh Y, Seridi L, Ryu T, Takahashi H, Orlando V, Carninci P, Ravasi T.

Sci Rep. 2016 Apr 26;6:25039. doi: 10.1038/srep25039.

9.

Accurate Prediction of Transposon-Derived piRNAs by Integrating Various Sequential and Physicochemical Features.

Luo L, Li D, Zhang W, Tu S, Zhu X, Tian G.

PLoS One. 2016 Apr 13;11(4):e0153268. doi: 10.1371/journal.pone.0153268. eCollection 2016.

10.

Computational Detection of piRNA in Human Using Support Vector Machine.

Seyeddokht A, Aslaminejad AA, Masoudi-Nejad A, Nassiri M, Zahiri J, Sadeghi B.

Avicenna J Med Biotechnol. 2016 Jan-Mar;8(1):36-41.

11.
12.

Prediction of piRNAs using transposon interaction and a support vector machine.

Wang K, Liang C, Liu J, Xiao H, Huang S, Xu J, Li F.

BMC Bioinformatics. 2014 Dec 30;15:419. doi: 10.1186/s12859-014-0419-6.

13.

The capacity of target silencing by Drosophila PIWI and piRNAs.

Post C, Clark JP, Sytnikova YA, Chirn GW, Lau NC.

RNA. 2014 Dec;20(12):1977-86. doi: 10.1261/rna.046300.114. Epub 2014 Oct 21.

14.

Piwi Proteins and piRNAs step onto the systems biology stage.

Clark JP, Lau NC.

Adv Exp Med Biol. 2014;825:159-97. doi: 10.1007/978-1-4939-1221-6_5.

15.

Towards a piRNA prediction using multiple kernel fusion and support vector machine.

Brayet J, Zehraoui F, Jeanson-Leh L, Israeli D, Tahi F.

Bioinformatics. 2014 Sep 1;30(17):i364-70. doi: 10.1093/bioinformatics/btu441.

16.

Implication of sperm RNAs in transgenerational inheritance of the effects of early trauma in mice.

Gapp K, Jawaid A, Sarkies P, Bohacek J, Pelczar P, Prados J, Farinelli L, Miska E, Mansuy IM.

Nat Neurosci. 2014 May;17(5):667-9. doi: 10.1038/nn.3695. Epub 2014 Apr 13.

17.

Cloning of the quail PIWI gene and characterization of PIWI binding to small RNAs.

Chen R, Chang G, Zhang Y, Dai A, Ma T, Li J, Zhai F, Hua D, Xia M, Chen G.

PLoS One. 2012;7(12):e51724. doi: 10.1371/journal.pone.0051724. Epub 2012 Dec 19.

18.

MicroRNAs and HIV-1: complex interactions.

Klase Z, Houzet L, Jeang KT.

J Biol Chem. 2012 Nov 30;287(49):40884-90. doi: 10.1074/jbc.R112.415448. Epub 2012 Oct 5. Review.

19.

A role for neuronal piRNAs in the epigenetic control of memory-related synaptic plasticity.

Rajasethupathy P, Antonov I, Sheridan R, Frey S, Sander C, Tuschl T, Kandel ER.

Cell. 2012 Apr 27;149(3):693-707. doi: 10.1016/j.cell.2012.02.057.

20.

Evolution of animal Piwi-interacting RNAs and prokaryotic CRISPRs.

Kumar MS, Chen KC.

Brief Funct Genomics. 2012 Jul;11(4):277-88. doi: 10.1093/bfgp/els016. Epub 2012 Apr 25. Review.

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