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Items: 1 to 20 of 55


SAIC: an iterative clustering approach for analysis of single cell RNA-seq data.

Yang L, Liu J, Lu Q, Riggs AD, Wu X.

BMC Genomics. 2017 Oct 3;18(Suppl 6):689. doi: 10.1186/s12864-017-4019-5.


The chromatin remodeling complex Swi/Snf regulates splicing of meiotic transcripts in Saccharomyces cerevisiae.

Venkataramanan S, Douglass S, Galivanche AR, Johnson TL.

Nucleic Acids Res. 2017 Jul 27;45(13):7708-7721. doi: 10.1093/nar/gkx373.


Stochastic timing in gene expression for simple regulatory strategies.

Co AD, Lagomarsino MC, Caselle M, Osella M.

Nucleic Acids Res. 2017 Feb 17;45(3):1069-1078. doi: 10.1093/nar/gkw1235.


First-passage time approach to controlling noise in the timing of intracellular events.

Ghusinga KR, Dennehy JJ, Singh A.

Proc Natl Acad Sci U S A. 2017 Jan 24;114(4):693-698. doi: 10.1073/pnas.1609012114. Epub 2017 Jan 9.


Positive Feedback Keeps Duration of Mitosis Temporally Insulated from Upstream Cell-Cycle Events.

Araujo AR, Gelens L, Sheriff RS, Santos SD.

Mol Cell. 2016 Oct 20;64(2):362-375. doi: 10.1016/j.molcel.2016.09.018.


Temporal Expression of a Master Regulator Drives Synchronous Sporulation in Budding Yeast.

Chia M, van Werven FJ.

G3 (Bethesda). 2016 Sep 7. pii: g3.116.034983. doi: 10.1534/g3.116.034983. [Epub ahead of print]


Integrated live imaging and molecular profiling of embryoid bodies reveals a synchronized progression of early differentiation.

Boxman J, Sagy N, Achanta S, Vadigepalli R, Nachman I.

Sci Rep. 2016 Aug 17;6:31623. doi: 10.1038/srep31623.


Transcription of the mating-type-regulated lncRNA IRT1 is governed by TORC1 and PKA.

Moretto F, van Werven FJ.

Curr Genet. 2017 May;63(2):325-329. doi: 10.1007/s00294-016-0639-6. Epub 2016 Aug 12.


Nutrient Control of Yeast Gametogenesis Is Mediated by TORC1, PKA and Energy Availability.

Weidberg H, Moretto F, Spedale G, Amon A, van Werven FJ.

PLoS Genet. 2016 Jun 6;12(6):e1006075. doi: 10.1371/journal.pgen.1006075. eCollection 2016 Jun.


Noise Expands the Response Range of the Bacillus subtilis Competence Circuit.

Mugler A, Kittisopikul M, Hayden L, Liu J, Wiggins CH, Süel GM, Walczak AM.

PLoS Comput Biol. 2016 Mar 22;12(3):e1004793. doi: 10.1371/journal.pcbi.1004793. eCollection 2016 Mar.


Water-Transfer Slows Aging in Saccharomyces cerevisiae.

Cohen A, Weindling E, Rabinovich E, Nachman I, Fuchs S, Chuartzman S, Gal L, Schuldiner M, Bar-Nun S.

PLoS One. 2016 Feb 10;11(2):e0148650. doi: 10.1371/journal.pone.0148650. eCollection 2016.


The asymmetry of telomere replication contributes to replicative senescence heterogeneity.

Bourgeron T, Xu Z, Doumic M, Teixeira MT.

Sci Rep. 2015 Oct 15;5:15326. doi: 10.1038/srep15326.


Noise in gene expression is coupled to growth rate.

Keren L, van Dijk D, Weingarten-Gabbay S, Davidi D, Jona G, Weinberger A, Milo R, Segal E.

Genome Res. 2015 Dec;25(12):1893-902. doi: 10.1101/gr.191635.115. Epub 2015 Sep 9.


Is the Cell Nucleus a Necessary Component in Precise Temporal Patterning?

Albert J, Rooman M.

PLoS One. 2015 Jul 30;10(7):e0134239. doi: 10.1371/journal.pone.0134239. eCollection 2015.


Control of relative timing and stoichiometry by a master regulator.

Goldschmidt Y, Yurkovsky E, Reif A, Rosner R, Akiva A, Nachman I.

PLoS One. 2015 May 22;10(5):e0127339. doi: 10.1371/journal.pone.0127339. eCollection 2015.


The physics of bacterial decision making.

Ben-Jacob E, Lu M, Schultz D, Onuchic JN.

Front Cell Infect Microbiol. 2014 Oct 30;4:154. doi: 10.3389/fcimb.2014.00154. eCollection 2014. Review.


Pulsatile dynamics in the yeast proteome.

Dalal CK, Cai L, Lin Y, Rahbar K, Elowitz MB.

Curr Biol. 2014 Sep 22;24(18):2189-2194. doi: 10.1016/j.cub.2014.07.076. Epub 2014 Sep 11.


Positive feedback of NDT80 expression ensures irreversible meiotic commitment in budding yeast.

Tsuchiya D, Yang Y, Lacefield S.

PLoS Genet. 2014 Jun 5;10(6):e1004398. doi: 10.1371/journal.pgen.1004398. eCollection 2014 Jun.


Noise genetics: inferring protein function by correlating phenotype with protein levels and localization in individual human cells.

Farkash-Amar S, Zimmer A, Eden E, Cohen A, Geva-Zatorsky N, Cohen L, Milo R, Sigal A, Danon T, Alon U.

PLoS Genet. 2014 Mar 6;10(3):e1004176. doi: 10.1371/journal.pgen.1004176. eCollection 2014 Mar.


Different levels of catabolite repression optimize growth in stable and variable environments.

New AM, Cerulus B, Govers SK, Perez-Samper G, Zhu B, Boogmans S, Xavier JB, Verstrepen KJ.

PLoS Biol. 2014 Jan;12(1):e1001764. doi: 10.1371/journal.pbio.1001764. Epub 2014 Jan 14.

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