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Items: 1 to 20 of 37

1.

STITCHER 2.0: primer design for overlapping PCR applications.

O'Halloran DM, Uriagereka-Herburger I, Bode K.

Sci Rep. 2017 Mar 30;7:45349. doi: 10.1038/srep45349.

2.

A Differentiation Transcription Factor Establishes Muscle-Specific Proteostasis in Caenorhabditis elegans.

Bar-Lavan Y, Shemesh N, Dror S, Ofir R, Yeger-Lotem E, Ben-Zvi A.

PLoS Genet. 2016 Dec 30;12(12):e1006531. doi: 10.1371/journal.pgen.1006531. eCollection 2016 Dec.

3.

Tissue enrichment analysis for C. elegans genomics.

Angeles-Albores D, N Lee RY, Chan J, Sternberg PW.

BMC Bioinformatics. 2016 Sep 13;17(1):366. doi: 10.1186/s12859-016-1229-9.

4.

Analysis of C. elegans muscle transcriptome using trans-splicing-based RNA tagging (SRT).

Ma X, Zhan G, Sleumer MC, Chen S, Liu W, Zhang MQ, Liu X.

Nucleic Acids Res. 2016 Dec 1;44(21):e156. Epub 2016 Aug 23.

5.

Robust Distal Tip Cell Pathfinding in the Face of Temperature Stress Is Ensured by Two Conserved microRNAS in Caenorhabditis elegans.

Burke SL, Hammell M, Ambros V.

Genetics. 2015 Aug;200(4):1201-18. doi: 10.1534/genetics.115.179184. Epub 2015 Jun 15.

6.

Identification of Wnt Pathway Target Genes Regulating the Division and Differentiation of Larval Seam Cells and Vulval Precursor Cells in Caenorhabditis elegans.

Gorrepati L, Krause MW, Chen W, Brodigan TM, Correa-Mendez M, Eisenmann DM.

G3 (Bethesda). 2015 Jun 5;5(8):1551-66. doi: 10.1534/g3.115.017715.

7.

Comparative RNA-Seq analysis reveals pervasive tissue-specific alternative polyadenylation in Caenorhabditis elegans intestine and muscles.

Blazie SM, Babb C, Wilky H, Rawls A, Park JG, Mangone M.

BMC Biol. 2015 Jan 20;13:4. doi: 10.1186/s12915-015-0116-6.

8.

Spatiotemporal transcriptomics reveals the evolutionary history of the endoderm germ layer.

Hashimshony T, Feder M, Levin M, Hall BK, Yanai I.

Nature. 2015 Mar 12;519(7542):219-22. doi: 10.1038/nature13996. Epub 2014 Dec 10.

9.
10.

Integrative analysis of C. elegans modENCODE ChIP-seq data sets to infer gene regulatory interactions.

Van Nostrand EL, Kim SK.

Genome Res. 2013 Jun;23(6):941-53. doi: 10.1101/gr.152876.112. Epub 2013 Mar 26.

12.

The atypical calpains: evolutionary analyses and roles in Caenorhabditis elegans cellular degeneration.

Joyce PI, Satija R, Chen M, Kuwabara PE.

PLoS Genet. 2012;8(3):e1002602. doi: 10.1371/journal.pgen.1002602. Epub 2012 Mar 29.

13.

Calpains mediate integrin attachment complex maintenance of adult muscle in Caenorhabditis elegans.

Etheridge T, Oczypok EA, Lehmann S, Fields BD, Shephard F, Jacobson LA, Szewczyk NJ.

PLoS Genet. 2012 Jan;8(1):e1002471. doi: 10.1371/journal.pgen.1002471. Epub 2012 Jan 12.

14.

Cell-type-specific nuclei purification from whole animals for genome-wide expression and chromatin profiling.

Steiner FA, Talbert PB, Kasinathan S, Deal RB, Henikoff S.

Genome Res. 2012 Apr;22(4):766-77. doi: 10.1101/gr.131748.111. Epub 2012 Jan 4.

15.

Caenorhabditis elegans cyclin D/CDK4 and cyclin E/CDK2 induce distinct cell cycle re-entry programs in differentiated muscle cells.

Korzelius J, The I, Ruijtenberg S, Prinsen MB, Portegijs V, Middelkoop TC, Groot Koerkamp MJ, Holstege FC, Boxem M, van den Heuvel S.

PLoS Genet. 2011 Nov;7(11):e1002362. doi: 10.1371/journal.pgen.1002362. Epub 2011 Nov 10.

16.

Myogenic conversion and transcriptional profiling of embryonic blastomeres in Caenorhabditis elegans.

Fukushige T, Krause M.

Methods. 2012 Jan;56(1):50-4. doi: 10.1016/j.ymeth.2011.10.001. Epub 2011 Oct 13.

17.

Biochemical and cell biological analysis of actin in the nematode Caenorhabditis elegans.

Ono S, Pruyne D.

Methods. 2012 Jan;56(1):11-7. doi: 10.1016/j.ymeth.2011.09.008. Epub 2011 Sep 16.

18.

Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle.

Meissner B, Rogalski T, Viveiros R, Warner A, Plastino L, Lorch A, Granger L, Segalat L, Moerman DG.

PLoS One. 2011;6(5):e19937. doi: 10.1371/journal.pone.0019937. Epub 2011 May 17.

19.

Isolation and culture of larval cells from C. elegans.

Zhang S, Banerjee D, Kuhn JR.

PLoS One. 2011 Apr 29;6(4):e19505. doi: 10.1371/journal.pone.0019505.

20.

Revealing developmental networks by comparative transcriptomics.

Hashimshony T, Yanai I.

Transcription. 2010 Nov;1(3):154-158. Epub 2010 Jul 27.

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