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Items: 1 to 20 of 67


Molecular Resources from Transcriptomes in the Brassicaceae Family.

Lopez L, Wolf EM, Pires JC, Edger PP, Koch MA.

Front Plant Sci. 2017 Aug 29;8:1488. doi: 10.3389/fpls.2017.01488. eCollection 2017.


The Evolving Definition of the Term "Gene".

Portin P, Wilkins A.

Genetics. 2017 Apr;205(4):1353-1364. doi: 10.1534/genetics.116.196956.


Between-species differences in gene copy number are enriched among functions critical for adaptive evolution in Arabidopsis halleri.

Suryawanshi V, Talke IN, Weber M, Eils R, Brors B, Clemens S, Krämer U.

BMC Genomics. 2016 Dec 22;17(Suppl 13):1034. doi: 10.1186/s12864-016-3319-5.


MicroRNA in Control of Gene Expression: An Overview of Nuclear Functions.

Catalanotto C, Cogoni C, Zardo G.

Int J Mol Sci. 2016 Oct 13;17(10). pii: E1712. Review.


Complexity and Specificity of the Neutrophil Transcriptomes in Juvenile Idiopathic Arthritis.

Hu Z, Jiang K, Frank MB, Chen Y, Jarvis JN.

Sci Rep. 2016 Jun 7;6:27453. doi: 10.1038/srep27453.


What is an RNA? A top layer for RNA classification.

Brosius J, Raabe CA.

RNA Biol. 2016;13(2):140-4. doi: 10.1080/15476286.2015.1128064.


Mining microsatellite markers from public expressed sequence tags databases for the study of threatened plants.

Lopez L, Barreiro R, Fischer M, Koch MA.

BMC Genomics. 2015 Oct 13;16:781. doi: 10.1186/s12864-015-2031-1.


RNA sequencing from human neutrophils reveals distinct transcriptional differences associated with chronic inflammatory states.

Jiang K, Sun X, Chen Y, Shen Y, Jarvis JN.

BMC Med Genomics. 2015 Aug 27;8:55. doi: 10.1186/s12920-015-0128-7.


Transcriptomic landscape of lncRNAs in inflammatory bowel disease.

Mirza AH, Berthelsen CH, Seemann SE, Pan X, Frederiksen KS, Vilien M, Gorodkin J, Pociot F.

Genome Med. 2015 May 13;7(1):39. doi: 10.1186/s13073-015-0162-2. eCollection 2015.


Fam40b is required for lineage commitment of murine embryonic stem cells.

Wagh V, Doss MX, Sabour D, Niemann R, Meganathan K, Jagtap S, Gaspar JA, Ardestani MA, Papadopoulos S, Gajewski M, Winkler J, Hescheler J, Sachinidis A.

Cell Death Dis. 2014 Jul 10;5:e1320. doi: 10.1038/cddis.2014.273.


Choice of transcripts and software has a large effect on variant annotation.

McCarthy DJ, Humburg P, Kanapin A, Rivas MA, Gaulton K, Cazier JB, Donnelly P.

Genome Med. 2014 Mar 31;6(3):26. doi: 10.1186/gm543. eCollection 2014.


The rise of regulatory RNA.

Morris KV, Mattick JS.

Nat Rev Genet. 2014 Jun;15(6):423-37. doi: 10.1038/nrg3722. Epub 2014 Apr 29. Review.


Complex tissue-specific patterns and distribution of multiple RAGE splice variants in different mammals.

López-Díez R, Rastrojo A, Villate O, Aguado B.

Genome Biol Evol. 2013;5(12):2420-35. doi: 10.1093/gbe/evt188.


Functional transcriptomics in the post-ENCODE era.

Mudge JM, Frankish A, Harrow J.

Genome Res. 2013 Dec;23(12):1961-73. doi: 10.1101/gr.161315.113. Epub 2013 Oct 30.


RIG-I and MDA-5 detection of viral RNA-dependent RNA polymerase activity restricts positive-strand RNA virus replication.

Nikonov A, Mölder T, Sikut R, Kiiver K, Männik A, Toots U, Lulla A, Lulla V, Utt A, Merits A, Ustav M.

PLoS Pathog. 2013;9(9):e1003610. doi: 10.1371/journal.ppat.1003610. Epub 2013 Sep 5.


Stem cell systems informatics for advanced clinical biodiagnostics: tracing molecular signatures from bench to bedside.

Faustino RS, Arrell DK, Folmes CD, Terzic A, Perez-Terzic C.

Croat Med J. 2013 Aug;54(4):319-29. Review.


Global gene expression response of a population exposed to benzene: a pilot study exploring the use of RNA-sequencing technology.

Thomas R, McHale CM, Lan Q, Hubbard AE, Zhang L, Vermeulen R, Li G, Rappaport SM, Yin S, Rothman N, Smith MT.

Environ Mol Mutagen. 2013 Aug;54(7):566-73. doi: 10.1002/em.21801. Epub 2013 Aug 1.


Understanding the regulatory and transcriptional complexity of the genome through structure.

Mercer TR, Mattick JS.

Genome Res. 2013 Jul;23(7):1081-8. doi: 10.1101/gr.156612.113. Review.


The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression.

Derrien T, Johnson R, Bussotti G, Tanzer A, Djebali S, Tilgner H, Guernec G, Martin D, Merkel A, Knowles DG, Lagarde J, Veeravalli L, Ruan X, Ruan Y, Lassmann T, Carninci P, Brown JB, Lipovich L, Gonzalez JM, Thomas M, Davis CA, Shiekhattar R, Gingeras TR, Hubbard TJ, Notredame C, Harrow J, Guigó R.

Genome Res. 2012 Sep;22(9):1775-89. doi: 10.1101/gr.132159.111.

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