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Items: 1 to 20 of 28


Guinier peak analysis for visual and automated inspection of small-angle X-ray scattering data.

Putnam CD.

J Appl Crystallogr. 2016 Aug 4;49(Pt 5):1412-1419. eCollection 2016 Oct 1.


Visualizing the Path of DNA through Proteins Using DREEM Imaging.

Wu D, Kaur P, Li ZM, Bradford KC, Wang H, Erie DA.

Mol Cell. 2016 Jan 21;61(2):315-23. doi: 10.1016/j.molcel.2015.12.012. Epub 2016 Jan 7.


Hybrid Approaches to Structural Characterization of Conformational Ensembles of Complex Macromolecular Systems Combining NMR Residual Dipolar Couplings and Solution X-ray Scattering.

Venditti V, Egner TK, Clore GM.

Chem Rev. 2016 Jun 8;116(11):6305-22. doi: 10.1021/acs.chemrev.5b00592. Epub 2016 Jan 7. Review.


Crystal structures of MBP fusion proteins.

Waugh DS.

Protein Sci. 2016 Mar;25(3):559-71. doi: 10.1002/pro.2863. Epub 2016 Jan 9. Review.


An Efficient Site-Specific Method for Irreversible Covalent Labeling of Proteins with a Fluorophore.

Liu J, Hanne J, Britton BM, Shoffner M, Albers AE, Bennett J, Zatezalo R, Barfield R, Rabuka D, Lee JB, Fishel R.

Sci Rep. 2015 Nov 19;5:16883. doi: 10.1038/srep16883.


Atomic force microscopy captures the initiation of methyl-directed DNA mismatch repair.

Josephs EA, Zheng T, Marszalek PE.

DNA Repair (Amst). 2015 Nov;35:71-84. doi: 10.1016/j.dnarep.2015.08.006. Epub 2015 Sep 21.


DNA Mismatch Repair.

Marinus MG.

EcoSal Plus. 2012 Nov;5(1). doi: 10.1128/ecosalplus.7.2.5.


Mismatch repair.

Fishel R.

J Biol Chem. 2015 Oct 30;290(44):26395-403. doi: 10.1074/jbc.R115.660142. Epub 2015 Sep 9. Review.


New insights into the mechanism of DNA mismatch repair.

Reyes GX, Schmidt TT, Kolodner RD, Hombauer H.

Chromosoma. 2015 Dec;124(4):443-62. doi: 10.1007/s00412-015-0514-0. Epub 2015 Apr 11. Review.


DNA conformations in mismatch repair probed in solution by X-ray scattering from gold nanocrystals.

Hura GL, Tsai CL, Claridge SA, Mendillo ML, Smith JM, Williams GJ, Mastroianni AJ, Alivisatos AP, Putnam CD, Kolodner RD, Tainer JA.

Proc Natl Acad Sci U S A. 2013 Oct 22;110(43):17308-13. doi: 10.1073/pnas.1308595110. Epub 2013 Oct 7.


Using stable MutS dimers and tetramers to quantitatively analyze DNA mismatch recognition and sliding clamp formation.

Groothuizen FS, Fish A, Petoukhov MV, Reumer A, Manelyte L, Winterwerp HH, Marinus MG, Lebbink JH, Svergun DI, Friedhoff P, Sixma TK.

Nucleic Acids Res. 2013 Sep;41(17):8166-81. doi: 10.1093/nar/gkt582. Epub 2013 Jul 1.


Engineered disulfide-forming amino acid substitutions interfere with a conformational change in the mismatch recognition complex Msh2-Msh6 required for mismatch repair.

Hargreaves VV, Putnam CD, Kolodner RD.

J Biol Chem. 2012 Nov 30;287(49):41232-44. doi: 10.1074/jbc.M112.402495. Epub 2012 Oct 8.


Single-molecule multiparameter fluorescence spectroscopy reveals directional MutS binding to mismatched bases in DNA.

Cristóvão M, Sisamakis E, Hingorani MM, Marx AD, Jung CP, Rothwell PJ, Seidel CA, Friedhoff P.

Nucleic Acids Res. 2012 Jul;40(12):5448-64. doi: 10.1093/nar/gks138. Epub 2012 Feb 24.


Stoichiometry of MutS and MutL at unrepaired mismatches in vivo suggests a mechanism of repair.

Elez M, Radman M, Matic I.

Nucleic Acids Res. 2012 May;40(9):3929-38. doi: 10.1093/nar/gkr1298. Epub 2012 Jan 12.


Mechanism of mismatch recognition revealed by human MutSβ bound to unpaired DNA loops.

Gupta S, Gellert M, Yang W.

Nat Struct Mol Biol. 2011 Dec 18;19(1):72-8. doi: 10.1038/nsmb.2175.


Native mass spectrometry provides direct evidence for DNA mismatch-induced regulation of asymmetric nucleotide binding in mismatch repair protein MutS.

Monti MC, Cohen SX, Fish A, Winterwerp HH, Barendregt A, Friedhoff P, Perrakis A, Heck AJ, Sixma TK, van den Heuvel RH, Lebbink JH.

Nucleic Acids Res. 2011 Oct;39(18):8052-64. doi: 10.1093/nar/gkr498. Epub 2011 Jul 6.


Atomic force microscopy captures MutS tetramers initiating DNA mismatch repair.

Jiang Y, Marszalek PE.

EMBO J. 2011 Jun 10;30(14):2881-93. doi: 10.1038/emboj.2011.180.


Chemical trapping of the dynamic MutS-MutL complex formed in DNA mismatch repair in Escherichia coli.

Winkler I, Marx AD, Lariviere D, Heinze RJ, Cristovao M, Reumer A, Curth U, Sixma TK, Friedhoff P.

J Biol Chem. 2011 May 13;286(19):17326-37. doi: 10.1074/jbc.M110.187641. Epub 2011 Mar 15.


DNA mismatch repair in eukaryotes and bacteria.

Fukui K.

J Nucleic Acids. 2010 Jul 27;2010. pii: 260512. doi: 10.4061/2010/260512.

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