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Items: 1 to 20 of 109

1.

An embryonic system to assess direct and indirect Wnt transcriptional targets.

Suresh J, Harmston N, Lim KK, Kaur P, Jin HJ, Lusk JB, Petretto E, Tolwinski NS.

Sci Rep. 2017 Sep 11;7(1):11092. doi: 10.1038/s41598-017-11519-z.

2.

Uncoupling evolutionary changes in DNA sequence, transcription factor occupancy and enhancer activity.

Khoueiry P, Girardot C, Ciglar L, Peng PC, Gustafson EH, Sinha S, Furlong EE.

Elife. 2017 Aug 9;6. pii: e28440. doi: 10.7554/eLife.28440.

3.

CF2 transcription factor is involved in the regulation of Mef2 RNA levels, nuclei number and muscle fiber size.

Arredondo JJ, Vivar J, Laine-Menéndez S, Martínez-Morentin L, Cervera M.

PLoS One. 2017 Jun 15;12(6):e0179194. doi: 10.1371/journal.pone.0179194. eCollection 2017.

4.

Mechanisms of Groucho-mediated repression revealed by genome-wide analysis of Groucho binding and activity.

Chambers M, Turki-Judeh W, Kim MW, Chen K, Gallaher SD, Courey AJ.

BMC Genomics. 2017 Feb 28;18(1):215. doi: 10.1186/s12864-017-3589-6.

5.

The Drosophila Gene Expression Tool (DGET) for expression analyses.

Hu Y, Comjean A, Perrimon N, Mohr SE.

BMC Bioinformatics. 2017 Feb 10;18(1):98. doi: 10.1186/s12859-017-1509-z.

6.

Inferring a role for methylation of intergenic DNA in the regulation of genes aberrantly expressed in precursor B-cell acute lymphoblastic leukemia.

Almamun M, Kholod O, Stuckel AJ, Levinson BT, Johnson NT, Arthur GL, Davis JW, Taylor KH.

Leuk Lymphoma. 2017 Sep;58(9):1-12. doi: 10.1080/10428194.2016.1272683. Epub 2017 Jan 17.

PMID:
28094574
7.

Drosophila poised enhancers are generated during tissue patterning with the help of repression.

Koenecke N, Johnston J, He Q, Meier S, Zeitlinger J.

Genome Res. 2017 Jan;27(1):64-74. doi: 10.1101/gr.209486.116. Epub 2016 Nov 14.

8.

Chromatin profiling of Drosophila CNS subpopulations identifies active transcriptional enhancers.

Pearson JC, McKay DJ, Lieb JD, Crews ST.

Development. 2016 Oct 15;143(20):3723-3732.

9.

Genome-wide identification of Drosophila dorso-ventral enhancers by differential histone acetylation analysis.

Koenecke N, Johnston J, Gaertner B, Natarajan M, Zeitlinger J.

Genome Biol. 2016 Sep 27;17(1):196.

10.

A matter of time - How transient transcription factor interactions create dynamic gene regulatory networks.

Swift J, Coruzzi GM.

Biochim Biophys Acta. 2017 Jan;1860(1):75-83. doi: 10.1016/j.bbagrm.2016.08.007. Epub 2016 Aug 18. Review.

PMID:
27546191
11.

Global analysis of dorsoventral patterning in the wasp Nasonia reveals extensive incorporation of novelty in a regulatory network.

Pers D, Buchta T, Özüak O, Wolff S, Pietsch JM, Memon MB, Roth S, Lynch JA.

BMC Biol. 2016 Aug 1;14:63. doi: 10.1186/s12915-016-0285-y.

13.

Stepwise Progression of Embryonic Patterning.

Sandler JE, Stathopoulos A.

Trends Genet. 2016 Jul;32(7):432-43. doi: 10.1016/j.tig.2016.04.004. Epub 2016 May 24. Review.

14.

A Clinical Indications Prediction Scale Based on TWIST1 for Human Mesenchymal Stem Cells.

Boregowda SV, Krishnappa V, Haga CL, Ortiz LA, Phinney DG.

EBioMedicine. 2015 Dec 24;4:62-73. doi: 10.1016/j.ebiom.2015.12.020. eCollection 2016 Feb.

15.

Understanding transcriptional regulatory networks using computational models.

He B, Tan K.

Curr Opin Genet Dev. 2016 Apr;37:101-8. doi: 10.1016/j.gde.2016.02.002. Epub 2016 Mar 4. Review.

16.

Quantitative Single-Embryo Profile of Drosophila Genome Activation and the Dorsal-Ventral Patterning Network.

Sandler JE, Stathopoulos A.

Genetics. 2016 Apr;202(4):1575-84. doi: 10.1534/genetics.116.186783. Epub 2016 Feb 19.

17.

TRAP-rc, Translating Ribosome Affinity Purification from Rare Cell Populations of Drosophila Embryos.

Bertin B, Renaud Y, Aradhya R, Jagla K, Junion G.

J Vis Exp. 2015 Sep 10;(103). doi: 10.3791/52985.

18.

The bHLH Transcription Factor Hand Regulates the Expression of Genes Critical to Heart and Muscle Function in Drosophila melanogaster.

Hallier B, Hoffmann J, Roeder T, Tögel M, Meyer H, Paululat A.

PLoS One. 2015 Aug 7;10(8):e0134204. doi: 10.1371/journal.pone.0134204. eCollection 2015.

19.

In Vivo Transcriptional Activation Using CRISPR/Cas9 in Drosophila.

Lin S, Ewen-Campen B, Ni X, Housden BE, Perrimon N.

Genetics. 2015 Oct;201(2):433-42. doi: 10.1534/genetics.115.181065. Epub 2015 Aug 5. Erratum in: Genetics. 2015 Dec;201(4):1615.

20.

BTB-Zinc Finger Oncogenes Are Required for Ras and Notch-Driven Tumorigenesis in Drosophila.

Doggett K, Turkel N, Willoughby LF, Ellul J, Murray MJ, Richardson HE, Brumby AM.

PLoS One. 2015 Jul 24;10(7):e0132987. doi: 10.1371/journal.pone.0132987. eCollection 2015.

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