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Items: 1 to 20 of 226

1.

Expression-based clustering of CAZyme-encoding genes of Aspergillus niger.

Gruben BS, Mäkelä MR, Kowalczyk JE, Zhou M, Benoit-Gelber I, De Vries RP.

BMC Genomics. 2017 Nov 23;18(1):900. doi: 10.1186/s12864-017-4164-x.

2.

FunGeneClusterS: Predicting fungal gene clusters from genome and transcriptome data.

Vesth TC, Brandl J, Andersen MR.

Synth Syst Biotechnol. 2016 Feb 23;1(2):122-129. doi: 10.1016/j.synbio.2016.01.002. eCollection 2016 Jun.

3.

Genome sequence of Talaromyces piceus 9-3 provides insights into lignocellulose degradation.

He R, Bai X, Cai P, Sun C, Zhang D, Chen S.

3 Biotech. 2017 Dec;7(6):368. doi: 10.1007/s13205-017-1001-5. Epub 2017 Oct 10.

PMID:
29062678
4.

A Comparison of Microsatellites in Phytopathogenic Aspergillus Species in Order to Develop Markers for the Assessment of Genetic Diversity among Its Isolates.

Mahfooz S, Singh SP, Mishra N, Mishra A.

Front Microbiol. 2017 Sep 20;8:1774. doi: 10.3389/fmicb.2017.01774. eCollection 2017.

5.

Current challenges of research on filamentous fungi in relation to human welfare and a sustainable bio-economy: a white paper.

Meyer V, Andersen MR, Brakhage AA, Braus GH, Caddick MX, Cairns TC, de Vries RP, Haarmann T, Hansen K, Hertz-Fowler C, Krappmann S, Mortensen UH, Peñalva MA, Ram AFJ, Head RM.

Fungal Biol Biotechnol. 2016 Aug 31;3:6. doi: 10.1186/s40694-016-0024-8. eCollection 2016.

6.

Let microorganisms do the talking, let us talk more about microorganisms.

Nai C, Magrini B, Offe J.

Fungal Biol Biotechnol. 2016 Jul 21;3:5. doi: 10.1186/s40694-016-0023-9. eCollection 2016.

7.

Unlocking the potential of fungi: the QuantFung project.

Büttel Z, Díaz R, Dirnberger B, Flak M, Grijseels S, Kwon MJ, Nielsen JCF, Nygård Y, Phule P, Pohl C, Prigent S, Randelovic M, Schütze T, Troppens D, Viggiano A.

Fungal Biol Biotechnol. 2015 Sep 16;2:6. doi: 10.1186/s40694-015-0016-0. eCollection 2015. No abstract available.

8.

The capacity of Aspergillus niger to sense and respond to cell wall stress requires at least three transcription factors: RlmA, MsnA and CrzA.

Fiedler MR, Lorenz A, Nitsche BM, van den Hondel CA, Ram AF, Meyer V.

Fungal Biol Biotechnol. 2014 Dec 1;1:5. doi: 10.1186/s40694-014-0005-8. eCollection 2014.

9.

Engineering of Aspergillus niger for the production of secondary metabolites.

Richter L, Wanka F, Boecker S, Storm D, Kurt T, Vural Ö, Süßmuth R, Meyer V.

Fungal Biol Biotechnol. 2014 Oct 14;1:4. doi: 10.1186/s40694-014-0004-9. eCollection 2014.

10.

RNA-sequencing reveals the complexities of the transcriptional response to lignocellulosic biofuel substrates in Aspergillus niger.

Pullan ST, Daly P, Delmas S, Ibbett R, Kokolski M, Neiteler A, van Munster JM, Wilson R, Blythe MJ, Gaddipati S, Tucker GA, Archer DB.

Fungal Biol Biotechnol. 2014 Nov 17;1:3. doi: 10.1186/s40694-014-0003-x. eCollection 2014.

11.

Polycistronic gene expression in Aspergillus niger.

Schuetze T, Meyer V.

Microb Cell Fact. 2017 Sep 25;16(1):162. doi: 10.1186/s12934-017-0780-z.

12.

High-quality draft genome sequence of a biofilm forming lignocellulolytic Aspergillus niger strain ATCC 10864.

Paul S, Ludeña Y, Villena GK, Yu F, Sherman DH, Gutiérrez-Correa M.

Stand Genomic Sci. 2017 Jul 17;12:37. doi: 10.1186/s40793-017-0254-2. eCollection 2017.

13.

Dynamic Fumonisin B₂ Production by Aspergillus niger Intented Used in Food Industry in China.

Han X, Jiang H, Xu J, Zhang J, Li F.

Toxins (Basel). 2017 Jul 9;9(7). pii: E217. doi: 10.3390/toxins9070217.

14.

Comparative transcriptome analysis reveals different strategies for degradation of steam-exploded sugarcane bagasse by Aspergillus niger and Trichoderma reesei.

Borin GP, Sanchez CC, de Santana ES, Zanini GK, Dos Santos RAC, de Oliveira Pontes A, de Souza AT, Dal'Mas RMMTS, Riaño-Pachón DM, Goldman GH, Oliveira JVC.

BMC Genomics. 2017 Jun 30;18(1):501. doi: 10.1186/s12864-017-3857-5.

15.

Differential β-glucosidase expression as a function of carbon source availability in Talaromyces amestolkiae: a genomic and proteomic approach.

de Eugenio LI, Méndez-Líter JA, Nieto-Domínguez M, Alonso L, Gil-Muñoz J, Barriuso J, Prieto A, Martínez MJ.

Biotechnol Biofuels. 2017 Jun 23;10:161. doi: 10.1186/s13068-017-0844-7. eCollection 2017.

16.

Hydrolytic potential of five fungal supernatants to enhance a commercial enzyme cocktail.

Peciulyte A, Pisano M, de Vries RP, Olsson L.

Biotechnol Lett. 2017 Sep;39(9):1403-1411. doi: 10.1007/s10529-017-2371-9. Epub 2017 Jun 1.

17.

Symbiosis-inspired approaches to antibiotic discovery.

Adnani N, Rajski SR, Bugni TS.

Nat Prod Rep. 2017 Jul 6;34(7):784-814. doi: 10.1039/c7np00009j. Review.

PMID:
28561849
18.

HisB as novel selection marker for gene targeting approaches in Aspergillus niger.

Fiedler MR, Gensheimer T, Kubisch C, Meyer V.

BMC Microbiol. 2017 Mar 8;17(1):57. doi: 10.1186/s12866-017-0960-3.

19.

Polygalacturonase gene pgxB in Aspergillus niger is a virulence factor in apple fruit.

Liu CQ, Hu KD, Li TT, Yang Y, Yang F, Li YH, Liu HP, Chen XY, Zhang H.

PLoS One. 2017 Mar 3;12(3):e0173277. doi: 10.1371/journal.pone.0173277. eCollection 2017.

20.

Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

de Vries RP, Riley R, Wiebenga A, Aguilar-Osorio G, Amillis S, Uchima CA, Anderluh G, Asadollahi M, Askin M, Barry K, Battaglia E, Bayram Ö, Benocci T, Braus-Stromeyer SA, Caldana C, Cánovas D, Cerqueira GC, Chen F, Chen W, Choi C, Clum A, Dos Santos RA, Damásio AR, Diallinas G, Emri T, Fekete E, Flipphi M, Freyberg S, Gallo A, Gournas C, Habgood R, Hainaut M, Harispe ML, Henrissat B, Hildén KS, Hope R, Hossain A, Karabika E, Karaffa L, Karányi Z, Kraševec N, Kuo A, Kusch H, LaButti K, Lagendijk EL, Lapidus A, Levasseur A, Lindquist E, Lipzen A, Logrieco AF, MacCabe A, Mäkelä MR, Malavazi I, Melin P, Meyer V, Mielnichuk N, Miskei M, Molnár ÁP, Mulé G, Ngan CY, Orejas M, Orosz E, Ouedraogo JP, Overkamp KM, Park HS, Perrone G, Piumi F, Punt PJ, Ram AF, Ramón A, Rauscher S, Record E, Riaño-Pachón DM, Robert V, Röhrig J, Ruller R, Salamov A, Salih NS, Samson RA, Sándor E, Sanguinetti M, Schütze T, Sepčić K, Shelest E, Sherlock G, Sophianopoulou V, Squina FM, Sun H, Susca A, Todd RB, Tsang A, Unkles SE, van de Wiele N, van Rossen-Uffink D, Oliveira JV, Vesth TC, Visser J, Yu JH, Zhou M, Andersen MR, Archer DB, Baker SE, Benoit I, Brakhage AA, Braus GH, Fischer R, Frisvad JC, Goldman GH, Houbraken J, Oakley B, Pócsi I, Scazzocchio C, Seiboth B, vanKuyk PA, Wortman J, Dyer PS, Grigoriev IV.

Genome Biol. 2017 Feb 14;18(1):28. doi: 10.1186/s13059-017-1151-0.

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