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Items: 20

1.

Fundamentals and Methods for T- and B-Cell Epitope Prediction.

Sanchez-Trincado JL, Gomez-Perosanz M, Reche PA.

J Immunol Res. 2017;2017:2680160. doi: 10.1155/2017/2680160. Epub 2017 Dec 28. Review.

2.

Discovery of a polystyrene binding peptide isolated from phage display library and its application in peptide immobilization.

Qiang X, Sun K, Xing L, Xu Y, Wang H, Zhou Z, Zhang J, Zhang F, Caliskan B, Wang M, Qiu Z.

Sci Rep. 2017 Jun 1;7(1):2673. doi: 10.1038/s41598-017-02891-x.

3.

An Introduction to B-Cell Epitope Mapping and In Silico Epitope Prediction.

Potocnakova L, Bhide M, Pulzova LB.

J Immunol Res. 2016;2016:6760830. doi: 10.1155/2016/6760830. Epub 2016 Dec 29. Review.

4.

Conformational B-cell epitope prediction method based on antigen preprocessing and mimotopes analysis.

Sun P, Ju H, Zhang B, Gu Y, Liu B, Huang Y, Zhang H, Li Y.

Biomed Res Int. 2015;2015:257030. doi: 10.1155/2015/257030. Epub 2015 Jan 29.

5.

Denosumab mimics the natural decoy receptor osteoprotegerin by interacting with its major binding site on RANKL.

Schieferdecker A, Voigt M, Riecken K, Braig F, Schinke T, Loges S, Bokemeyer C, Fehse B, Binder M.

Oncotarget. 2014 Aug 30;5(16):6647-53.

6.

Bioinformatics resources and tools for conformational B-cell epitope prediction.

Sun P, Ju H, Liu Z, Ning Q, Zhang J, Zhao X, Huang Y, Ma Z, Li Y.

Comput Math Methods Med. 2013;2013:943636. doi: 10.1155/2013/943636. Epub 2013 Jul 21. Review.

7.

Peptide-based vaccinology: experimental and computational approaches to target hypervariable viruses through the fine characterization of protective epitopes recognized by monoclonal antibodies and the identification of T-cell-activating peptides.

Castelli M, Cappelletti F, Diotti RA, Sautto G, Criscuolo E, Dal Peraro M, Clementi N.

Clin Dev Immunol. 2013;2013:521231. doi: 10.1155/2013/521231. Epub 2013 Jun 26. Review.

8.

Functional dissection of the epidermal growth factor receptor epitopes targeted by panitumumab and cetuximab.

Voigt M, Braig F, Göthel M, Schulte A, Lamszus K, Bokemeyer C, Binder M.

Neoplasia. 2012 Nov;14(11):1023-31.

9.

PepMapper: a collaborative web tool for mapping epitopes from affinity-selected peptides.

Chen W, Guo WW, Huang Y, Ma Z.

PLoS One. 2012;7(5):e37869. doi: 10.1371/journal.pone.0037869. Epub 2012 May 25.

10.

Antigen-antibody interface properties: composition, residue interactions, and features of 53 non-redundant structures.

Ramaraj T, Angel T, Dratz EA, Jesaitis AJ, Mumey B.

Biochim Biophys Acta. 2012 Mar;1824(3):520-32. doi: 10.1016/j.bbapap.2011.12.007. Epub 2012 Jan 10.

11.

MimoDB 2.0: a mimotope database and beyond.

Huang J, Ru B, Zhu P, Nie F, Yang J, Wang X, Dai P, Lin H, Guo FB, Rao N.

Nucleic Acids Res. 2012 Jan;40(Database issue):D271-7. doi: 10.1093/nar/gkr922. Epub 2011 Nov 3.

12.

MimoPro: a more efficient Web-based tool for epitope prediction using phage display libraries.

Chen WH, Sun PP, Lu Y, Guo WW, Huang YX, Ma ZQ.

BMC Bioinformatics. 2011 May 25;12:199. doi: 10.1186/1471-2105-12-199.

13.

An Allergen Portrait Gallery: Representative Structures and an Overview of IgE Binding Surfaces.

Schein CH, Ivanciuc O, Midoro-Horiuti T, Goldblum RM, Braun W.

Bioinform Biol Insights. 2010 Oct 11;4:113-25. doi: 10.4137/BBI.S5737.

14.

Identification of conformational B-cell Epitopes in an antigen from its primary sequence.

Ansari HR, Raghava GP.

Immunome Res. 2010 Oct 20;6:6. doi: 10.1186/1745-7580-6-6.

15.

Immunoinformatics: an integrated scenario.

Tomar N, De RK.

Immunology. 2010 Oct;131(2):153-68. doi: 10.1111/j.1365-2567.2010.03330.x. Epub 2010 Aug 16. Review.

16.

SAROTUP: scanner and reporter of target-unrelated peptides.

Huang J, Ru B, Li S, Lin H, Guo FB.

J Biomed Biotechnol. 2010;2010:101932. doi: 10.1155/2010/101932. Epub 2010 Mar 21.

17.
18.

Mimotope vaccination--from allergy to cancer.

Knittelfelder R, Riemer AB, Jensen-Jarolim E.

Expert Opin Biol Ther. 2009 Apr;9(4):493-506. doi: 10.1517/14712590902870386 . Review.

19.

Pep-3D-Search: a method for B-cell epitope prediction based on mimotope analysis.

Huang YX, Bao YL, Guo SY, Wang Y, Zhou CG, Li YX.

BMC Bioinformatics. 2008 Dec 16;9:538. doi: 10.1186/1471-2105-9-538.

20.

Inducing cross-clade neutralizing antibodies against HIV-1 by immunofocusing.

Humbert M, Rasmussen RA, Ong H, Kaiser FM, Hu SL, Ruprecht RM.

PLoS One. 2008;3(12):e3937. doi: 10.1371/journal.pone.0003937. Epub 2008 Dec 15.

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