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Annotation and cluster analysis of spatiotemporal- and sex-related lncRNA expression in rhesus macaque brain.

Liu S, Wang Z, Chen D, Zhang B, Tian RR, Wu J, Zhang Y, Xu K, Yang LM, Cheng C, Ma J, Lv L, Zheng YT, Hu X, Zhang Y, Wang X, Li J.

Genome Res. 2017 Sep;27(9):1608-1620. doi: 10.1101/gr.217463.116. Epub 2017 Jul 7.


A genetic signature of the evolution of loss of flight in the Galapagos cormorant.

Burga A, Wang W, Ben-David E, Wolf PC, Ramey AM, Verdugo C, Lyons K, Parker PG, Kruglyak L.

Science. 2017 Jun 2;356(6341). pii: eaal3345. doi: 10.1126/science.aal3345.


Solving the master equation for Indels.

Holmes IH.

BMC Bioinformatics. 2017 May 12;18(1):255. doi: 10.1186/s12859-017-1665-1.


Emerging roles for ncRNAs in alcohol use disorders.

Mayfield RD.

Alcohol. 2017 May;60:31-39. doi: 10.1016/j.alcohol.2017.01.004. Epub 2017 Apr 15. Review.


LncRNA Snhg1, a non-degradable sponge for miR-338, promotes expression of proto-oncogene CST3 in primary esophageal cancer cells.

Yan Y, Fan Q, Wang L, Zhou Y, Li J, Zhou K.

Oncotarget. 2017 May 30;8(22):35750-35760. doi: 10.18632/oncotarget.16189.


Analytical Biases Associated with GC-Content in Molecular Evolution.

Romiguier J, Roux C.

Front Genet. 2017 Feb 15;8:16. doi: 10.3389/fgene.2017.00016. eCollection 2017.


Biases in the SMART-DNA library preparation method associated with genomic poly dA/dT sequences.

Vardi O, Shamir I, Javasky E, Goren A, Simon I.

PLoS One. 2017 Feb 24;12(2):e0172769. doi: 10.1371/journal.pone.0172769. eCollection 2017.


Differential Gene Expression in the Human Brain Is Associated with Conserved, but Not Accelerated, Noncoding Sequences.

Meyer KA, Marques-Bonet T, Sestan N.

Mol Biol Evol. 2017 May 1;34(5):1217-1229. doi: 10.1093/molbev/msx076.


Calculating Higher-Order Moments of Phylogenetic Stochastic Mapping Summaries in Linear Time.

Dhar A, Minin VN.

J Comput Biol. 2017 May;24(5):377-399. doi: 10.1089/cmb.2016.0172. Epub 2017 Feb 8.


Probing the Association between Early Evolutionary Markers and Schizophrenia.

Srinivasan S, Bettella F, Hassani S, Wang Y, Witoelar A, Schork AJ, Thompson WK, Collier DA, Desikan RS, Melle I, Dale AM, Djurovic S, Andreassen OA.

PLoS One. 2017 Jan 12;12(1):e0169227. doi: 10.1371/journal.pone.0169227. eCollection 2017.


Down-Regulation of lncRNA-AK001085 and its Influences on the Diagnosis of Ankylosing Spondylitis.

Li X, Chai W, Zhang G, Ni M, Chen J, Dong J, Zhou Y, Hao L, Bai Y, Wang Y.

Med Sci Monit. 2017 Jan 2;23:11-16.


Mutations in Human Accelerated Regions Disrupt Cognition and Social Behavior.

Doan RN, Bae BI, Cubelos B, Chang C, Hossain AA, Al-Saad S, Mukaddes NM, Oner O, Al-Saffar M, Balkhy S, Gascon GG; Homozygosity Mapping Consortium for Autism, Nieto M, Walsh CA.

Cell. 2016 Oct 6;167(2):341-354.e12. doi: 10.1016/j.cell.2016.08.071. Epub 2016 Sep 22.


lncRNA expression in the auditory forebrain during postnatal development.

Guo Y, Zhang P, Sheng Q, Zhao S, Hackett TA.

Gene. 2016 Nov 15;593(1):201-16. doi: 10.1016/j.gene.2016.08.027. Epub 2016 Aug 18.


Brain enhancer activities at the gene-poor 5p14.1 autism-associated locus.

Inoue YU, Inoue T.

Sci Rep. 2016 Aug 9;6:31227. doi: 10.1038/srep31227.


Identification of Multiple Forms of RNA Transcripts Associated with Human-Specific Retrotransposed Gene Copies.

Mori S, Hayashi M, Inagaki S, Oshima T, Tateishi K, Fujii H, Suzuki S.

Genome Biol Evol. 2016 Aug 16;8(8):2288-96. doi: 10.1093/gbe/evw156.


Conservation and tissue-specific transcription patterns of long noncoding RNAs.

Ward M, McEwan C, Mills JD, Janitz M.

J Hum Transcr. 2015 Jan 1;1(1):2-9. Epub 2015 Aug 10.


Emergence and Evolution of Hominidae-Specific Coding and Noncoding Genomic Sequences.

Saber MM, Adeyemi Babarinde I, Hettiarachchi N, Saitou N.

Genome Biol Evol. 2016 Jul 12;8(7):2076-92. doi: 10.1093/gbe/evw132.


Controlling for Phylogenetic Relatedness and Evolutionary Rates Improves the Discovery of Associations Between Species' Phenotypic and Genomic Differences.

Prudent X, Parra G, Schwede P, Roscito JG, Hiller M.

Mol Biol Evol. 2016 Aug;33(8):2135-50. doi: 10.1093/molbev/msw098. Epub 2016 May 24.


Single-cell analysis of long non-coding RNAs in the developing human neocortex.

Liu SJ, Nowakowski TJ, Pollen AA, Lui JH, Horlbeck MA, Attenello FJ, He D, Weissman JS, Kriegstein AR, Diaz AA, Lim DA.

Genome Biol. 2016 Apr 14;17:67. doi: 10.1186/s13059-016-0932-1.


Cerebral cortex expansion and folding: what have we learned?

Fernández V, Llinares-Benadero C, Borrell V.

EMBO J. 2016 May 17;35(10):1021-44. doi: 10.15252/embj.201593701. Epub 2016 Apr 7. Review.

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