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Items: 15

1.

The unique genomic landscape surrounding the EPSPS gene in glyphosate resistant Amaranthus palmeri: a repetitive path to resistance.

Molin WT, Wright AA, Lawton-Rauh A, Saski CA.

BMC Genomics. 2017 Jan 17;18(1):91. doi: 10.1186/s12864-016-3336-4.

2.

BioNano genome mapping of individual chromosomes supports physical mapping and sequence assembly in complex plant genomes.

Staňková H, Hastie AR, Chan S, Vrána J, Tulpová Z, Kubaláková M, Visendi P, Hayashi S, Luo M, Batley J, Edwards D, Doležel J, Šimková H.

Plant Biotechnol J. 2016 Jul;14(7):1523-31. doi: 10.1111/pbi.12513. Epub 2016 Jan 23.

3.

A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B.

Kobayashi F, Wu J, Kanamori H, Tanaka T, Katagiri S, Karasawa W, Kaneko S, Watanabe S, Sakaguchi T, Hanawa Y, Fujisawa H, Kurita K, Abe C, Iehisa JC, Ohno R, Šafář J, Šimková H, Mukai Y, Hamada M, Saito M, Ishikawa G, Katayose Y, Endo TR, Takumi S, Nakamura T, Sato K, Ogihara Y, Hayakawa K, Doležel J, Nasuda S, Matsumoto T, Handa H.

BMC Genomics. 2015 Aug 12;16:595. doi: 10.1186/s12864-015-1803-y.

4.

Chromosome-Specific Painting in Cucumis Species Using Bulked Oligonucleotides.

Han Y, Zhang T, Thammapichai P, Weng Y, Jiang J.

Genetics. 2015 Jul;200(3):771-9. doi: 10.1534/genetics.115.177642. Epub 2015 May 13.

5.

Construction and characterization of a bacterial artificial chromosome library for the hexaploid wheat line 92R137.

Zeng Q, Yuan F, Xu X, Shi X, Nie X, Zhuang H, Chen X, Wang Z, Wang X, Huang L, Han D, Kang Z.

Biomed Res Int. 2014;2014:845806. doi: 10.1155/2014/845806. Epub 2014 May 5.

6.

Whole-genome profiling and shotgun sequencing delivers an anchored, gene-decorated, physical map assembly of bread wheat chromosome 6A.

Poursarebani N, Nussbaumer T, Simková H, Safář J, Witsenboer H, van Oeveren J, Doležel J, Mayer KF, Stein N, Schnurbusch T.

Plant J. 2014 Jul;79(2):334-47. doi: 10.1111/tpj.12550. Epub 2014 Jun 19.

7.

The physical map of wheat chromosome 1BS provides insights into its gene space organization and evolution.

Raats D, Frenkel Z, Krugman T, Dodek I, Sela H, Simková H, Magni F, Cattonaro F, Vautrin S, Bergès H, Wicker T, Keller B, Leroy P, Philippe R, Paux E, Doležel J, Feuillet C, Korol A, Fahima T.

Genome Biol. 2013 Dec 20;14(12):R138. doi: 10.1186/gb-2013-14-12-r138.

8.

A physical map of the short arm of wheat chromosome 1A.

Breen J, Wicker T, Shatalina M, Frenkel Z, Bertin I, Philippe R, Spielmeyer W, Simková H, Safář J, Cattonaro F, Scalabrin S, Magni F, Vautrin S, Bergès H; International Wheat Genome Sequencing Consortium, Paux E, Fahima T, Doležel J, Korol A, Feuillet C, Keller B.

PLoS One. 2013 Nov 21;8(11):e80272. doi: 10.1371/journal.pone.0080272. eCollection 2013.

9.

Genomic resources for gene discovery, functional genome annotation, and evolutionary studies of maize and its close relatives.

Wang C, Shi X, Liu L, Li H, Ammiraju JS, Kudrna DA, Xiong W, Wang H, Dai Z, Zheng Y, Lai J, Jin W, Messing J, Bennetzen JL, Wing RA, Luo M.

Genetics. 2013 Nov;195(3):723-37. doi: 10.1534/genetics.113.157115. Epub 2013 Sep 13. Erratum in: Genetics. 2014 Jan;196(1):365.

10.

Comparative genomics of Lupinus angustifolius gene-rich regions: BAC library exploration, genetic mapping and cytogenetics.

Książkiewicz M, Wyrwa K, Szczepaniak A, Rychel S, Majcherkiewicz K, Przysiecka Ł, Karlowski W, Wolko B, Naganowska B.

BMC Genomics. 2013 Feb 5;14:79. doi: 10.1186/1471-2164-14-79.

11.

Chromosomes in the flow to simplify genome analysis.

Doležel J, Vrána J, Safář J, Bartoš J, Kubaláková M, Simková H.

Funct Integr Genomics. 2012 Aug;12(3):397-416. doi: 10.1007/s10142-012-0293-0. Epub 2012 Aug 16. Review.

12.

BAC libraries from wheat chromosome 7D: efficient tool for positional cloning of aphid resistance genes.

Simková H, Safář J, Kubaláková M, Suchánková P, Cíhalíková J, Robert-Quatre H, Azhaguvel P, Weng Y, Peng J, Lapitan NL, Ma Y, You FM, Luo MC, Bartoš J, Doležel J.

J Biomed Biotechnol. 2011;2011:302543. doi: 10.1155/2011/302543. Epub 2010 Dec 23.

13.

Coupling amplified DNA from flow-sorted chromosomes to high-density SNP mapping in barley.

Simková H, Svensson JT, Condamine P, Hribová E, Suchánková P, Bhat PR, Bartos J, Safár J, Close TJ, Dolezel J.

BMC Genomics. 2008 Jun 19;9:294. doi: 10.1186/1471-2164-9-294.

14.

Wheat genomics: present status and future prospects.

Gupta PK, Mir RR, Mohan A, Kumar J.

Int J Plant Genomics. 2008;2008:896451. doi: 10.1155/2008/896451.

15.

A novel resource for genomics of Triticeae: BAC library specific for the short arm of rye (Secale cereale L.) chromosome 1R (1RS).

Simková H, Safár J, Suchánková P, Kovárová P, Bartos J, Kubaláková M, Janda J, Cíhalíková J, Mago R, Lelley T, Dolezel J.

BMC Genomics. 2008 May 21;9:237. doi: 10.1186/1471-2164-9-237.

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