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Generic Amplicon Deep Sequencing to Determine Ilarvirus Species Diversity in Australian Prunus.

Kinoti WM, Constable FE, Nancarrow N, Plummer KM, Rodoni B.

Front Microbiol. 2017 Jun 30;8:1219. doi: 10.3389/fmicb.2017.01219. eCollection 2017.


Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard.

Meshram AR, Vader A, Kristiansen S, Gabrielsen TM.

Front Microbiol. 2017 Jun 28;8:1099. doi: 10.3389/fmicb.2017.01099. eCollection 2017.


Salivary density of Streptococcus mutans and Streptococcus sobrinus and dental caries in children and adolescents with Down syndrome.

Scalioni F, Carrada C, Machado F, Devito K, Ribeiro LC, Cesar D, Ribeiro R.

J Appl Oral Sci. 2017 May-Jun;25(3):250-257. doi: 10.1590/1678-7757-2016-0241.


Microbial Community Structure of Deep-sea Hydrothermal Vents on the Ultraslow Spreading Southwest Indian Ridge.

Ding J, Zhang Y, Wang H, Jian H, Leng H, Xiao X.

Front Microbiol. 2017 Jun 13;8:1012. doi: 10.3389/fmicb.2017.01012. eCollection 2017.


A Small Number of Low-abundance Bacteria Dominate Plant Species-specific Responses during Rhizosphere Colonization.

Dawson W, Hör J, Egert M, van Kleunen M, Pester M.

Front Microbiol. 2017 May 29;8:975. doi: 10.3389/fmicb.2017.00975. eCollection 2017.


Sustaining Rare Marine Microorganisms: Macroorganisms As Repositories and Dispersal Agents of Microbial Diversity.

Troussellier M, Escalas A, Bouvier T, Mouillot D.

Front Microbiol. 2017 May 29;8:947. doi: 10.3389/fmicb.2017.00947. eCollection 2017.


Comparison of the active and resident community of a coastal microbial mat.

Cardoso DC, Sandionigi A, Cretoiu MS, Casiraghi M, Stal L, Bolhuis H.

Sci Rep. 2017 Jun 7;7(1):2969. doi: 10.1038/s41598-017-03095-z.


Methane Dynamics in a Tropical Serpentinizing Environment: The Santa Elena Ophiolite, Costa Rica.

Crespo-Medina M, Twing KI, Sánchez-Murillo R, Brazelton WJ, McCollom TM, Schrenk MO.

Front Microbiol. 2017 May 23;8:916. doi: 10.3389/fmicb.2017.00916. eCollection 2017.


Analysis on Fungal Diversity in Rhizosphere Soil of Continuous Cropping Potato Subjected to Different Furrow-Ridge Mulching Managements.

Qin S, Yeboah S, Xu X, Liu Y, Yu B.

Front Microbiol. 2017 May 10;8:845. doi: 10.3389/fmicb.2017.00845. eCollection 2017.


Reconstructing a herbivore's diet using a novel rbcL DNA mini-barcode for plants.

Erickson DL, Reed E, Ramachandran P, Bourg NA, McShea WJ, Ottesen A.

AoB Plants. 2017 Apr 21;9(3):plx015. doi: 10.1093/aobpla/plx015. eCollection 2017 May.


Molecular Techniques for the Detection of Organisms in Aquatic Environments, with Emphasis on Harmful Algal Bloom Species.

Medlin LK, Orozco J.

Sensors (Basel). 2017 May 22;17(5). pii: E1184. doi: 10.3390/s17051184. Review.


Comparative Genomics Unravels the Functional Roles of Co-occurring Acidophilic Bacteria in Bioleaching Heaps.

Zhang X, Liu X, Liang Y, Xiao Y, Ma L, Guo X, Miao B, Liu H, Peng D, Huang W, Yin H.

Front Microbiol. 2017 May 5;8:790. doi: 10.3389/fmicb.2017.00790. eCollection 2017.


Exploring the Ecological Coherence between the Spatial and Temporal Patterns of Bacterioplankton in Boreal Lakes.

Niño-García JP, Ruiz-González C, Del Giorgio PA.

Front Microbiol. 2017 Apr 21;8:636. doi: 10.3389/fmicb.2017.00636. eCollection 2017.


Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform.

Wen C, Wu L, Qin Y, Van Nostrand JD, Ning D, Sun B, Xue K, Liu F, Deng Y, Liang Y, Zhou J.

PLoS One. 2017 Apr 28;12(4):e0176716. doi: 10.1371/journal.pone.0176716. eCollection 2017.


ESPRIT-Forest: Parallel clustering of massive amplicon sequence data in subquadratic time.

Cai Y, Zheng W, Yao J, Yang Y, Mai V, Mao Q, Sun Y.

PLoS Comput Biol. 2017 Apr 24;13(4):e1005518. doi: 10.1371/journal.pcbi.1005518. eCollection 2017 Apr.


Comparative Evaluation of Four Bacteria-Specific Primer Pairs for 16S rRNA Gene Surveys.

Thijs S, Op De Beeck M, Beckers B, Truyens S, Stevens V, Van Hamme JD, Weyens N, Vangronsveld J.

Front Microbiol. 2017 Mar 28;8:494. doi: 10.3389/fmicb.2017.00494. eCollection 2017.


Second Era of OMICS in Caries Research: Moving Past the Phase of Disillusionment.

Nascimento MM, Zaura E, Mira A, Takahashi N, Ten Cate JM.

J Dent Res. 2017 Jul;96(7):733-740. doi: 10.1177/0022034517701902. Epub 2017 Apr 6.


The Role of Enriched Microbial Consortium on Iron-Reducing Bioaugmentation in Sediments.

Pan Y, Yang X, Xu M, Sun G.

Front Microbiol. 2017 Mar 20;8:462. doi: 10.3389/fmicb.2017.00462. eCollection 2017.


From reads to operational taxonomic units: an ensemble processing pipeline for MiSeq amplicon sequencing data.

Mysara M, Njima M, Leys N, Raes J, Monsieurs P.

Gigascience. 2017 Feb 1;6(2):1-10. doi: 10.1093/gigascience/giw017.


Reactivation of Deep Subsurface Microbial Community in Response to Methane or Methanol Amendment.

Rajala P, Bomberg M.

Front Microbiol. 2017 Mar 17;8:431. doi: 10.3389/fmicb.2017.00431. eCollection 2017.

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