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Items: 1 to 20 of 21

1.

Sequence Analysis and Comparative Study of the Protein Subunits of Archaeal RNase P.

Samanta MP, Lai SM, Daniels CJ, Gopalan V.

Biomolecules. 2016 Apr 20;6(2). pii: E22. doi: 10.3390/biom6020022. Review.

2.

Functional implication of archaeal homologues of human RNase P protein pair Pop5 and Rpp30.

Hamasaki M, Hazeyama K, Iwasaki F, Ueda T, Nakashima T, Kakuta Y, Kimura M.

J Biochem. 2016 Jan;159(1):31-40. doi: 10.1093/jb/mvv067. Epub 2015 Jul 7.

3.

Uncovering the stoichiometry of Pyrococcus furiosus RNase P, a multi-subunit catalytic ribonucleoprotein complex, by surface-induced dissociation and ion mobility mass spectrometry.

Ma X, Lai LB, Lai SM, Tanimoto A, Foster MP, Wysocki VH, Gopalan V.

Angew Chem Int Ed Engl. 2014 Oct 20;53(43):11483-7. doi: 10.1002/anie.201405362. Epub 2014 Sep 4.

4.

Fidelity of tRNA 5'-maturation: a possible basis for the functional dependence of archaeal and eukaryal RNase P on multiple protein cofactors.

Chen WY, Singh D, Lai LB, Stiffler MA, Lai HD, Foster MP, Gopalan V.

Nucleic Acids Res. 2012 May;40(10):4666-80. doi: 10.1093/nar/gks013. Epub 2012 Jan 31.

5.

Thermodynamics of coupled folding in the interaction of archaeal RNase P proteins RPP21 and RPP29.

Xu Y, Oruganti SV, Gopalan V, Foster MP.

Biochemistry. 2012 Jan 31;51(4):926-35. doi: 10.1021/bi201674d. Epub 2012 Jan 18.

6.

Modular architecture of eukaryotic RNase P and RNase MRP revealed by electron microscopy.

Hipp K, Galani K, Batisse C, Prinz S, Böttcher B.

Nucleic Acids Res. 2012 Apr;40(7):3275-88. doi: 10.1093/nar/gkr1217. Epub 2011 Dec 13.

7.

Assembly of the complex between archaeal RNase P proteins RPP30 and Pop5.

Crowe BL, Bohlen CJ, Wilson RC, Gopalan V, Foster MP.

Archaea. 2011;2011:891531. doi: 10.1155/2011/891531. Epub 2011 Nov 13.

8.

Interactions of a Pop5/Rpp1 heterodimer with the catalytic domain of RNase MRP.

Perederina A, Khanova E, Quan C, Berezin I, Esakova O, Krasilnikov AS.

RNA. 2011 Oct;17(10):1922-31. doi: 10.1261/rna.2855511. Epub 2011 Aug 30.

9.

Cooperative RNP assembly: complementary rescue of structural defects by protein and RNA subunits of archaeal RNase P.

Chen WY, Xu Y, Cho IM, Oruganti SV, Foster MP, Gopalan V.

J Mol Biol. 2011 Aug 12;411(2):368-83. doi: 10.1016/j.jmb.2011.05.012. Epub 2011 Jun 12.

10.

Crystal structure of a metal-dependent phosphoesterase (YP_910028.1) from Bifidobacterium adolescentis: Computational prediction and experimental validation of phosphoesterase activity.

Han GW, Ko J, Farr CL, Deller MC, Xu Q, Chiu HJ, Miller MD, Sefcikova J, Somarowthu S, Beuning PJ, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA, Ondrechen MJ.

Proteins. 2011 Jul;79(7):2146-60. doi: 10.1002/prot.23035. Epub 2011 May 2.

11.

Dissecting functional cooperation among protein subunits in archaeal RNase P, a catalytic ribonucleoprotein complex.

Chen WY, Pulukkunat DK, Cho IM, Tsai HY, Gopalan V.

Nucleic Acids Res. 2010 Dec;38(22):8316-27. doi: 10.1093/nar/gkq668. Epub 2010 Aug 12.

12.

Of proteins and RNA: the RNase P/MRP family.

Esakova O, Krasilnikov AS.

RNA. 2010 Sep;16(9):1725-47. doi: 10.1261/rna.2214510. Epub 2010 Jul 13. Review.

13.

Identification of archaeal proteins that affect the exosome function in vitro.

Luz JS, Ramos CR, Santos MC, Coltri PP, Palhano FL, Foguel D, Zanchin NI, Oliveira CC.

BMC Biochem. 2010 May 27;11:22. doi: 10.1186/1471-2091-11-22.

14.

Expression, purification and structural analysis of the Pyrococcus abyssi RNA binding protein PAB1135.

Luz JS, Barbosa JA, Ramos CR, Oliveira CC.

BMC Res Notes. 2010 Apr 9;3:97. doi: 10.1186/1756-0500-3-97.

15.

Heterodimerization of the human RNase P/MRP subunits Rpp20 and Rpp25 is a prerequisite for interaction with the P3 arm of RNase MRP RNA.

Hands-Taylor KL, Martino L, Tata R, Babon JJ, Bui TT, Drake AF, Beavil RL, Pruijn GJ, Brown PR, Conte MR.

Nucleic Acids Res. 2010 Jul;38(12):4052-66. doi: 10.1093/nar/gkq141. Epub 2010 Mar 9.

16.

Unexpected diversity of RNase P, an ancient tRNA processing enzyme: challenges and prospects.

Lai LB, Vioque A, Kirsebom LA, Gopalan V.

FEBS Lett. 2010 Jan 21;584(2):287-96. doi: 10.1016/j.febslet.2009.11.048. Review.

18.

Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner.

Amero CD, Boomershine WP, Xu Y, Foster M.

Biochemistry. 2008 Nov 11;47(45):11704-10. doi: 10.1021/bi8015982. Epub 2008 Oct 16.

19.

Studies on Methanocaldococcus jannaschii RNase P reveal insights into the roles of RNA and protein cofactors in RNase P catalysis.

Pulukkunat DK, Gopalan V.

Nucleic Acids Res. 2008 Jul;36(12):4172-80. doi: 10.1093/nar/gkn360. Epub 2008 Jun 16.

20.

Functional reconstitution and characterization of Pyrococcus furiosus RNase P.

Tsai HY, Pulukkunat DK, Woznick WK, Gopalan V.

Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16147-52. Epub 2006 Oct 19.

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