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Items: 1 to 20 of 42


Coenzyme Q regulates the expression of essential genes of the pathogen- and xenobiotic-associated defense pathway in C. elegans.

Fischer A, Niklowitz P, Menke T, Döring F.

J Clin Biochem Nutr. 2015 Nov;57(3):171-7. doi: 10.3164/jcbn.15-46. Epub 2015 Aug 29.


Spatiotemporal transcriptomics reveals the evolutionary history of the endoderm germ layer.

Hashimshony T, Feder M, Levin M, Hall BK, Yanai I.

Nature. 2015 Mar 12;519(7542):219-22. doi: 10.1038/nature13996. Epub 2014 Dec 10.


Potential conservation of circadian clock proteins in the phylum Nematoda as revealed by bioinformatic searches.

Romanowski A, Garavaglia MJ, Goya ME, Ghiringhelli PD, Golombek DA.

PLoS One. 2014 Nov 14;9(11):e112871. doi: 10.1371/journal.pone.0112871. eCollection 2014.


Genome-scale studies of aging: challenges and opportunities.

McCormick MA, Kennedy BK.

Curr Genomics. 2012 Nov;13(7):500-7. doi: 10.2174/138920212803251454.


SH3 interactome conserves general function over specific form.

Xin X, Gfeller D, Cheng J, Tonikian R, Sun L, Guo A, Lopez L, Pavlenco A, Akintobi A, Zhang Y, Rual JF, Currell B, Seshagiri S, Hao T, Yang X, Shen YA, Salehi-Ashtiani K, Li J, Cheng AT, Bouamalay D, Lugari A, Hill DE, Grimes ML, Drubin DG, Grant BD, Vidal M, Boone C, Sidhu SS, Bader GD.

Mol Syst Biol. 2013;9:652. doi: 10.1038/msb.2013.9.


Transcriptome analyses reveal protein and domain families that delineate stage-related development in the economically important parasitic nematodes, Ostertagia ostertagi and Cooperia oncophora.

Heizer E, Zarlenga DS, Rosa B, Gao X, Gasser RB, De Graef J, Geldhof P, Mitreva M.

BMC Genomics. 2013 Feb 22;14:118. doi: 10.1186/1471-2164-14-118.


A UPR-independent infection-specific role for a BiP/GRP78 protein in the control of antimicrobial peptide expression in C. elegans epidermis.

Couillault C, Fourquet P, Pophillat M, Ewbank JJ.

Virulence. 2012 May 1;3(3):299-308. doi: 10.4161/viru.20384. Epub 2012 May 1.


A genome-wide collection of Mos1 transposon insertion mutants for the C. elegans research community.

Vallin E, Gallagher J, Granger L, Martin E, Belougne J, Maurizio J, Duverger Y, Scaglione S, Borrel C, Cortier E, Abouzid K, Carre-Pierrat M, Gieseler K, Ségalat L, Kuwabara PE, Ewbank JJ.

PLoS One. 2012;7(2):e30482. doi: 10.1371/journal.pone.0030482. Epub 2012 Feb 8.


Approaches to Fungal Genome Annotation.

Haas BJ, Zeng Q, Pearson MD, Cuomo CA, Wortman JR.

Mycology. 2011 Oct 3;2(3):118-141.


Using C. elegans for antimicrobial drug discovery.

Desalermos A, Muhammed M, Glavis-Bloom J, Mylonakis E.

Expert Opin Drug Discov. 2011 Jun 1;6(6):645-652.


A comprehensive analysis of gene expression changes provoked by bacterial and fungal infection in C. elegans.

Engelmann I, Griffon A, Tichit L, Montañana-Sanchis F, Wang G, Reinke V, Waterston RH, Hillier LW, Ewbank JJ.

PLoS One. 2011;6(5):e19055. doi: 10.1371/journal.pone.0019055. Epub 2011 May 13.


Major prospects for exploring canine vector borne diseases and novel intervention methods using 'omic technologies.

Gasser RB, Cantacessi C, Campbell BE, Hofmann A, Otranto D.

Parasit Vectors. 2011 Apr 13;4:53. doi: 10.1186/1756-3305-4-53. Review.


Systems vaccinology.

Pulendran B, Li S, Nakaya HI.

Immunity. 2010 Oct 29;33(4):516-29. doi: 10.1016/j.immuni.2010.10.006. Review.


Condition-adapted stress and longevity gene regulation by Caenorhabditis elegans SKN-1/Nrf.

Oliveira RP, Porter Abate J, Dilks K, Landis J, Ashraf J, Murphy CT, Blackwell TK.

Aging Cell. 2009 Sep;8(5):524-41. doi: 10.1111/j.1474-9726.2009.00501.x. Epub 2009 Jul 3.


Interspecies data mining to predict novel ING-protein interactions in human.

Gordon PM, Soliman MA, Bose P, Trinh Q, Sensen CW, Riabowol K.

BMC Genomics. 2008 Sep 18;9:426. doi: 10.1186/1471-2164-9-426.


GMODWeb: a web framework for the Generic Model Organism Database.

O'Connor BD, Day A, Cain S, Arnaiz O, Sperling L, Stein LD.

Genome Biol. 2008;9(6):R102. doi: 10.1186/gb-2008-9-6-r102. Epub 2008 Jun 20.


Identification of direct target genes using joint sequence and expression likelihood with application to DAF-16.

Yu RX, Liu J, True N, Wang W.

PLoS One. 2008 Mar 19;3(3):e1821. doi: 10.1371/journal.pone.0001821.


Pairing of competitive and topologically distinct regulatory modules enhances patterned gene expression.

Yanai I, Baugh LR, Smith JJ, Roehrig C, Shen-Orr SS, Claggett JM, Hill AA, Slonim DK, Hunter CP.

Mol Syst Biol. 2008;4:163. doi: 10.1038/msb.2008.6. Epub 2008 Feb 12.


A Caenorhabditis motif compendium for studying transcriptional gene regulation.

Dieterich C, Sommer RJ.

BMC Genomics. 2008 Jan 23;9:30. doi: 10.1186/1471-2164-9-30.

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