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Items: 1 to 20 of 42


β3-chimaerin, a novel member of the chimaerin Rac-GAP family.

Zubeldia-Brenner L, Gutierrez-Uzquiza A, Barrio-Real L, Wang H, Kazanietz MG, Leskow FC.

Mol Biol Rep. 2014;41(4):2067-76. doi: 10.1007/s11033-014-3055-3. Epub 2014 Jan 16.


Alterations of epigenetic signatures in hepatocyte nuclear factor 4α deficient mouse liver determined by improved ChIP-qPCR and (h)MeDIP-qPCR assays.

Zhang Q, Lei X, Lu H.

PLoS One. 2014 Jan 10;9(1):e84925. doi: 10.1371/journal.pone.0084925. eCollection 2014.


Network insights into the genes regulated by hepatocyte nuclear factor 4 in response to drug induced perturbations: a review.

Azmi AS, Bao GW, Gao J, Mohammad RM, Sarkar FH.

Curr Drug Discov Technol. 2013 Jun;10(2):147-54. Review.


Genome-wide location analysis reveals distinct transcriptional circuitry by paralogous regulators Foxa1 and Foxa2.

Bochkis IM, Schug J, Ye DZ, Kurinna S, Stratton SA, Barton MC, Kaestner KH.

PLoS Genet. 2012;8(6):e1002770. doi: 10.1371/journal.pgen.1002770. Epub 2012 Jun 21.


Detection of interacting transcription factors in human tissues using predicted DNA binding affinity.

Myšičková A, Vingron M.

BMC Genomics. 2012;13 Suppl 1:S2. doi: 10.1186/1471-2164-13-S1-S2. Epub 2012 Jan 17.


Cancer associated epigenetic transitions identified by genome-wide histone methylation binding profiles in human colorectal cancer samples and paired normal mucosa.

Enroth S, Rada-Iglesisas A, Andersson R, Wallerman O, Wanders A, Påhlman L, Komorowski J, Wadelius C.

BMC Cancer. 2011 Oct 19;11:450. doi: 10.1186/1471-2407-11-450.


A high resolution genome-wide scan of HNF4α recognition sites infers a regulatory gene network in colon cancer.

Weltmeier F, Borlak J.

PLoS One. 2011;6(7):e21667. doi: 10.1371/journal.pone.0021667. Epub 2011 Jul 28.


Enhancers regulate progression of development in mammalian cells.

Kranz AL, Eils R, König R.

Nucleic Acids Res. 2011 Nov 1;39(20):8689-702. doi: 10.1093/nar/gkr602. Epub 2011 Jul 23.


Finding subtypes of transcription factor motif pairs with distinct regulatory roles.

Bais AS, Kaminski N, Benos PV.

Nucleic Acids Res. 2011 Jun;39(11):e76. doi: 10.1093/nar/gkr205. Epub 2011 Apr 12.


Expression profile analysis of the inflammatory response regulated by hepatocyte nuclear factor 4α.

Wang Z, Bishop EP, Burke PA.

BMC Genomics. 2011 Feb 25;12:128. doi: 10.1186/1471-2164-12-128.


Proteomic analysis of native hepatocyte nuclear factor-4α (HNF4α) isoforms, phosphorylation status, and interactive cofactors.

Daigo K, Kawamura T, Ohta Y, Ohashi R, Katayose S, Tanaka T, Aburatani H, Naito M, Kodama T, Ihara S, Hamakubo T.

J Biol Chem. 2011 Jan 7;286(1):674-86. doi: 10.1074/jbc.M110.154732. Epub 2010 Nov 3. Erratum in: J Biol Chem. 2013 Aug 16;288(33):24161.


Integrative epigenomic and genomic analysis of malignant pheochromocytoma.

Sandgren J, Andersson R, Rada-Iglesias A, Enroth S, Akerstrom G, Dumanski JP, Komorowski J, Westin G, Wadelius C.

Exp Mol Med. 2010 Jul 31;42(7):484-502.


Identification of interacting transcription factors regulating tissue gene expression in human.

Hu Z, Gallo SM.

BMC Genomics. 2010 Jan 19;11:49. doi: 10.1186/1471-2164-11-49.


Integrated approach for the identification of human hepatocyte nuclear factor 4alpha target genes using protein binding microarrays.

Bolotin E, Liao H, Ta TC, Yang C, Hwang-Verslues W, Evans JR, Jiang T, Sladek FM.

Hepatology. 2010 Feb;51(2):642-53. doi: 10.1002/hep.23357.


Differential binding and co-binding pattern of FOXA1 and FOXA3 and their relation to H3K4me3 in HepG2 cells revealed by ChIP-seq.

Motallebipour M, Ameur A, Reddy Bysani MS, Patra K, Wallerman O, Mangion J, Barker MA, McKernan KJ, Komorowski J, Wadelius C.

Genome Biol. 2009;10(11):R129. doi: 10.1186/gb-2009-10-11-r129. Epub 2009 Nov 17.


Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIP-sequencing.

Wallerman O, Motallebipour M, Enroth S, Patra K, Bysani MS, Komorowski J, Wadelius C.

Nucleic Acids Res. 2009 Dec;37(22):7498-508. doi: 10.1093/nar/gkp823.


DAX-1 acts as a novel corepressor of orphan nuclear receptor HNF4alpha and negatively regulates gluconeogenic enzyme gene expression.

Nedumaran B, Hong S, Xie YB, Kim YH, Seo WY, Lee MW, Lee CH, Koo SH, Choi HS.

J Biol Chem. 2009 Oct 2;284(40):27511-23. doi: 10.1074/jbc.M109.034660. Epub 2009 Aug 3.


Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions.

MacArthur S, Li XY, Li J, Brown JB, Chu HC, Zeng L, Grondona BP, Hechmer A, Simirenko L, Keränen SV, Knowles DW, Stapleton M, Bickel P, Biggin MD, Eisen MB.

Genome Biol. 2009;10(7):R80. doi: 10.1186/gb-2009-10-7-r80. Epub 2009 Jul 23.


Identification of DNA-dependent protein kinase as a cofactor for the forkhead transcription factor FoxA2.

Nock A, Ascano JM, Jones T, Barrero MJ, Sugiyama N, Tomita M, Ishihama Y, Malik S.

J Biol Chem. 2009 Jul 24;284(30):19915-26. doi: 10.1074/jbc.M109.016295. Epub 2009 May 28.


Identification of candidate regulatory SNPs by combination of transcription-factor-binding site prediction, SNP genotyping and haploChIP.

Ameur A, Rada-Iglesias A, Komorowski J, Wadelius C.

Nucleic Acids Res. 2009 Jul;37(12):e85. doi: 10.1093/nar/gkp381. Epub 2009 May 18.

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