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Items: 15

1.

Thermostability of Enzymes from Molecular Dynamics Simulations.

Zeiske T, Stafford KA, Palmer AG 3rd.

J Chem Theory Comput. 2016 Jun 14;12(6):2489-92. doi: 10.1021/acs.jctc.6b00120. Epub 2016 May 6.

PMID:
27123810
2.

Local Ordering at Mobile Sites in Proteins from Nuclear Magnetic Resonance Relaxation: The Role of Site Symmetry.

Tchaicheeyan O, Freed JH, Meirovitch E.

J Phys Chem B. 2016 Mar 24;120(11):2886-98. doi: 10.1021/acs.jpcb.6b00524. Epub 2016 Mar 14.

3.

The unusual internal motion of the villin headpiece subdomain.

Harpole KW, O'Brien ES, Clark MA, McKnight CJ, Vugmeyster L, Wand AJ.

Protein Sci. 2016 Feb;25(2):423-32. doi: 10.1002/pro.2831. Epub 2015 Oct 29.

4.

Glassy dynamics of protein methyl groups revealed by deuteron NMR.

Vugmeyster L, Ostrovsky D, Penland K, Hoatson GL, Vold RL.

J Phys Chem B. 2013 Jan 31;117(4):1051-61. doi: 10.1021/jp311112j. Epub 2013 Jan 22.

5.

Exposing the Moving Parts of Proteins with NMR Spectroscopy.

Peng JW.

J Phys Chem Lett. 2012 Apr 19;3(8):1039-1051. Epub 2012 Apr 2.

6.

Temperature dependence of fast carbonyl backbone dynamics in chicken villin headpiece subdomain.

Vugmeyster L, Ostrovsky D.

J Biomol NMR. 2011 Jun;50(2):119-27. doi: 10.1007/s10858-011-9500-x. Epub 2011 Mar 17.

7.

An introduction to NMR-based approaches for measuring protein dynamics.

Kleckner IR, Foster MP.

Biochim Biophys Acta. 2011 Aug;1814(8):942-68. doi: 10.1016/j.bbapap.2010.10.012. Epub 2010 Nov 6. Review.

8.

Nonexponential decay of internal rotational correlation functions of native proteins and self-similar structural fluctuations.

Cote Y, Senet P, Delarue P, Maisuradze GG, Scheraga HA.

Proc Natl Acad Sci U S A. 2010 Nov 16;107(46):19844-9. doi: 10.1073/pnas.1013674107. Epub 2010 Nov 2.

10.

Loop-tryptophan human purine nucleoside phosphorylase reveals submillisecond protein dynamics.

Ghanem M, Zhadin N, Callender R, Schramm VL.

Biochemistry. 2009 Apr 28;48(16):3658-68. doi: 10.1021/bi802339c.

11.

NMR and MD studies of the temperature-dependent dynamics of RNA YNMG-tetraloops.

Ferner J, Villa A, Duchardt E, Widjajakusuma E, Wöhnert J, Stock G, Schwalbe H.

Nucleic Acids Res. 2008 Apr;36(6):1928-40. doi: 10.1093/nar/gkm1183. Epub 2008 Feb 13.

12.

A theory of protein dynamics to predict NMR relaxation.

Caballero-Manrique E, Bray JK, Deutschman WA, Dahlquist FW, Guenza MG.

Biophys J. 2007 Dec 15;93(12):4128-40. Epub 2007 Aug 31.

13.

Temperature dependence of fast dynamics in proteins.

Song XJ, Flynn PF, Sharp KA, Wand AJ.

Biophys J. 2007 Mar 15;92(6):L43-5. Epub 2007 Jan 11.

14.

Protein dynamics from NMR: the slowly relaxing local structure analysis compared with model-free analysis.

Meirovitch E, Shapiro YE, Polimeno A, Freed JH.

J Phys Chem A. 2006 Jul 13;110(27):8366-96.

15.

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