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Items: 1 to 20 of 67

1.

Comparative Genomics of the Extreme Acidophile Acidithiobacillus thiooxidans Reveals Intraspecific Divergence and Niche Adaptation.

Zhang X, Feng X, Tao J, Ma L, Xiao Y, Liang Y, Liu X, Yin H.

Int J Mol Sci. 2016 Aug 19;17(8). pii: E1355. doi: 10.3390/ijms17081355.

2.

Characterization of a Cyanobacterial Chloride-pumping Rhodopsin and Its Conversion into a Proton Pump.

Hasemi T, Kikukawa T, Kamo N, Demura M.

J Biol Chem. 2016 Jan 1;291(1):355-62. doi: 10.1074/jbc.M115.688614. Epub 2015 Nov 17.

3.

A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes.

Pfeiffer F, Oesterhelt D.

Life (Basel). 2015 Jun 2;5(2):1427-44. doi: 10.3390/life5021427.

4.

Archaeal extrachromosomal genetic elements.

Wang H, Peng N, Shah SA, Huang L, She Q.

Microbiol Mol Biol Rev. 2015 Mar;79(1):117-52. doi: 10.1128/MMBR.00042-14. Review.

5.

The effects of extremes of pH on the growth and transcriptomic profiles of three haloarchaea.

Moran-Reyna A, Coker JA.

Version 2. F1000Res. 2014 Jul 22 [revised 2014 Aug 29];3:168. doi: 10.12688/f1000research.4789.2. eCollection 2014.

6.

Genomic and phenotypic attributes of novel salinivibrios from stromatolites, sediment and water from a high altitude lake.

Gorriti MF, Dias GM, Chimetto LA, Trindade-Silva AE, Silva BS, Mesquita MM, Gregoracci GB, Farias ME, Thompson CC, Thompson FL.

BMC Genomics. 2014 Jun 13;15:473. doi: 10.1186/1471-2164-15-473.

7.

Protein adaptations in archaeal extremophiles.

Reed CJ, Lewis H, Trejo E, Winston V, Evilia C.

Archaea. 2013;2013:373275. doi: 10.1155/2013/373275. Epub 2013 Sep 16. Review.

8.

Complete genome sequence of Halorhodospira halophila SL1.

Challacombe JF, Majid S, Deole R, Brettin TS, Bruce D, Delano SF, Detter JC, Gleasner CD, Han CS, Misra M, Reitenga KG, Mikhailova N, Woyke T, Pitluck S, Nolan M, Land ML, Saunders E, Tapia R, Lapidus A, Ivanova N, Hoff WD.

Stand Genomic Sci. 2013 Apr 15;8(2):206-14. doi: 10.4056/sigs.3677284. eCollection 2013.

9.

Amino acid substitutions in cold-adapted proteins from Halorubrum lacusprofundi, an extremely halophilic microbe from antarctica.

Dassarma S, Capes MD, Karan R, Dassarma P.

PLoS One. 2013;8(3):e58587. doi: 10.1371/journal.pone.0058587. Epub 2013 Mar 11.

10.

Mechanisms of metal resistance and homeostasis in haloarchaea.

Srivastava P, Kowshik M.

Archaea. 2013;2013:732864. doi: 10.1155/2013/732864. Epub 2013 Feb 21. Review.

11.

Genome of the haloarchaeon Natronomonas moolapensis, a neutrophilic member of a previously haloalkaliphilic genus.

Dyall-Smith ML, Pfeiffer F, Oberwinkler T, Klee K, Rampp M, Palm P, Gross K, Schuster SC, Oesterhelt D.

Genome Announc. 2013 Mar 21;1(2):e0009513. doi: 10.1128/genomeA.00095-13.

12.

Using Haloarcula marismortui bacteriorhodopsin as a fusion tag for enhancing and visible expression of integral membrane proteins in Escherichia coli.

Hsu MF, Yu TF, Chou CC, Fu HY, Yang CS, Wang AH.

PLoS One. 2013;8(2):e56363. doi: 10.1371/journal.pone.0056363. Epub 2013 Feb 15.

13.

Acquisition of 1,000 eubacterial genes physiologically transformed a methanogen at the origin of Haloarchaea.

Nelson-Sathi S, Dagan T, Landan G, Janssen A, Steel M, McInerney JO, Deppenmeier U, Martin WF.

Proc Natl Acad Sci U S A. 2012 Dec 11;109(50):20537-42. doi: 10.1073/pnas.1209119109. Epub 2012 Nov 26.

14.

Quantifying homologous replacement of loci between haloarchaeal species.

Williams D, Gogarten JP, Papke RT.

Genome Biol Evol. 2012;4(12):1223-44. doi: 10.1093/gbe/evs098.

15.

Diversity and evolution of multiple orc/cdc6-adjacent replication origins in haloarchaea.

Wu Z, Liu H, Liu J, Liu X, Xiang H.

BMC Genomics. 2012 Sep 14;13:478. doi: 10.1186/1471-2164-13-478.

16.

The complete genome sequence of Natrinema sp. J7-2, a haloarchaeon capable of growth on synthetic media without amino acid supplements.

Feng J, Liu B, Zhang Z, Ren Y, Li Y, Gan F, Huang Y, Chen X, Shen P, Wang L, Tang B, Tang XF.

PLoS One. 2012;7(7):e41621. doi: 10.1371/journal.pone.0041621. Epub 2012 Jul 23.

17.

Sequencing of seven haloarchaeal genomes reveals patterns of genomic flux.

Lynch EA, Langille MG, Darling A, Wilbanks EG, Haltiner C, Shao KS, Starr MO, Teiling C, Harkins TT, Edwards RA, Eisen JA, Facciotti MT.

PLoS One. 2012;7(7):e41389. doi: 10.1371/journal.pone.0041389. Epub 2012 Jul 24.

18.

Diversity and subcellular distribution of archaeal secreted proteins.

Szabo Z, Pohlschroder M.

Front Microbiol. 2012 Jul 2;3:207. doi: 10.3389/fmicb.2012.00207. eCollection 2012.

19.

Ser(262) determines the chloride-dependent colour tuning of a new halorhodopsin from Haloquadratum walsbyi.

Fu HY, Chang YN, Jheng MJ, Yang CS.

Biosci Rep. 2012 Oct;32(5):501-9. doi: 10.1042/BSR20120054.

20.

A comparative genomics perspective on the genetic content of the alkaliphilic haloarchaeon Natrialba magadii ATCC 43099T.

Siddaramappa S, Challacombe JF, Decastro RE, Pfeiffer F, Sastre DE, Giménez MI, Paggi RA, Detter JC, Davenport KW, Goodwin LA, Kyrpides N, Tapia R, Pitluck S, Lucas S, Woyke T, Maupin-Furlow JA.

BMC Genomics. 2012 May 4;13:165. doi: 10.1186/1471-2164-13-165.

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