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Inter-Fork Strand Annealing causes genomic deletions during the termination of DNA replication.

Morrow CA, Nguyen MO, Fower A, Wong IN, Osman F, Bryer C, Whitby MC.

Elife. 2017 Jun 6;6. pii: e25490. doi: 10.7554/eLife.25490.


Low- and High-LET Ionizing Radiation Induces Delayed Homologous Recombination that Persists for Two Weeks before Resolving.

Allen CP, Hirakawa H, Nakajima NI, Moore S, Nie J, Sharma N, Sugiura M, Hoki Y, Araki R, Abe M, Okayasu R, Fujimori A, Nickoloff JA.

Radiat Res. 2017 Jul;188(1):82-93. doi: 10.1667/RR14748.1. Epub 2017 May 23.


Generation of chromosomal translocations that lead to conditional fusion protein expression using CRISPR-Cas9 and homology-directed repair.

Vanoli F, Jasin M.

Methods. 2017 May 15;121-122:138-145. doi: 10.1016/j.ymeth.2017.05.006. Epub 2017 May 15.


Transposable Elements in Human Cancer: Causes and Consequences of Deregulation.

Anwar SL, Wulaningsih W, Lehmann U.

Int J Mol Sci. 2017 May 4;18(5). pii: E974. doi: 10.3390/ijms18050974. Review.


RNA editing-dependent epitranscriptome diversity in cancer stem cells.

Jiang Q, Crews LA, Holm F, Jamieson CHM.

Nat Rev Cancer. 2017 Jun;17(6):381-392. doi: 10.1038/nrc.2017.23. Epub 2017 Apr 18. Review.


CRISPR-Cas9-guided oncogenic chromosomal translocations with conditional fusion protein expression in human mesenchymal cells.

Vanoli F, Tomishima M, Feng W, Lamribet K, Babin L, Brunet E, Jasin M.

Proc Natl Acad Sci U S A. 2017 Apr 4;114(14):3696-3701. doi: 10.1073/pnas.1700622114. Epub 2017 Mar 21.



Hromas R, Williamson E, Lee SH, Nickoloff J.

Trans Am Clin Climatol Assoc. 2016;127:176-195.


Regulation of Single-Strand Annealing and its Role in Genome Maintenance.

Bhargava R, Onyango DO, Stark JM.

Trends Genet. 2016 Sep;32(9):566-75. doi: 10.1016/j.tig.2016.06.007. Epub 2016 Jul 19. Review.


Noncanonical views of homology-directed DNA repair.

Verma P, Greenberg RA.

Genes Dev. 2016 May 15;30(10):1138-54. doi: 10.1101/gad.280545.116. Review.


The endonuclease domain of the LINE-1 ORF2 protein can tolerate multiple mutations.

Kines KJ, Sokolowski M, deHaro DL, Christian CM, Baddoo M, Smither ME, Belancio VP.

Mob DNA. 2016 Apr 19;7:8. doi: 10.1186/s13100-016-0064-x. eCollection 2016.


Alu elements and DNA double-strand break repair.

White TB, Morales ME, Deininger PL.

Mob Genet Elements. 2015 Nov 5;5(6):81-85. eCollection 2015 Nov-Dec.


Characterization of chromosomal translocation breakpoint sequences in solid tumours: "an in silico analysis".

Daga A, Ansari A, Rawal R, Umrania V.

Open Med Inform J. 2015 Apr 30;9:1-8. doi: 10.2174/1874431101509010001. eCollection 2015.


SINE transcription by RNA polymerase III is suppressed by histone methylation but not by DNA methylation.

Varshney D, Vavrova-Anderson J, Oler AJ, Cowling VH, Cairns BR, White RJ.

Nat Commun. 2015 Mar 23;6:6569. doi: 10.1038/ncomms7569.


The contribution of alu elements to mutagenic DNA double-strand break repair.

Morales ME, White TB, Streva VA, DeFreece CB, Hedges DJ, Deininger PL.

PLoS Genet. 2015 Mar 11;11(3):e1005016. doi: 10.1371/journal.pgen.1005016. eCollection 2015 Mar.


Fission yeast Pxd1 promotes proper DNA repair by activating Rad16XPF and inhibiting Dna2.

Zhang JM, Liu XM, Ding YH, Xiong LY, Ren JY, Zhou ZX, Wang HT, Zhang MJ, Yu Y, Dong MQ, Du LL.

PLoS Biol. 2014 Sep 9;12(9):e1001946. doi: 10.1371/journal.pbio.1001946. eCollection 2014 Sep.


Potential for genomic instability associated with retrotranspositionally-incompetent L1 loci.

Kines KJ, Sokolowski M, deHaro DL, Christian CM, Belancio VP.

Nucleic Acids Res. 2014;42(16):10488-502. doi: 10.1093/nar/gku687. Epub 2014 Aug 20.


The Alu-rich genomic architecture of SPAST predisposes to diverse and functionally distinct disease-associated CNV alleles.

Boone PM, Yuan B, Campbell IM, Scull JC, Withers MA, Baggett BC, Beck CR, Shaw CJ, Stankiewicz P, Moretti P, Goodwin WE, Hein N, Fink JK, Seong MW, Seo SH, Park SS, Karbassi ID, Batish SD, Ordóñez-Ugalde A, Quintáns B, Sobrido MJ, Stemmler S, Lupski JR.

Am J Hum Genet. 2014 Aug 7;95(2):143-61. doi: 10.1016/j.ajhg.2014.06.014. Epub 2014 Jul 24.


Double-strand break repair by interchromosomal recombination: an in vivo repair mechanism utilized by multiple somatic tissues in mammals.

White RR, Sung P, Vestal CG, Benedetto G, Cornelio N, Richardson C.

PLoS One. 2013 Dec 13;8(12):e84379. doi: 10.1371/journal.pone.0084379. eCollection 2013.


Translocation junctions in TCF3-PBX1 acute lymphoblastic leukemia/lymphoma cluster near transposable elements.

Rodić N, Zampella JG, Cornish TC, Wheelan SJ, Burns KH.

Mob DNA. 2013 Oct 17;4(1):22. doi: 10.1186/1759-8753-4-22.


Yeast pol4 promotes tel1-regulated chromosomal translocations.

Ruiz JF, Pardo B, Sastre-Moreno G, Aguilera A, Blanco L.

PLoS Genet. 2013;9(7):e1003656. doi: 10.1371/journal.pgen.1003656. Epub 2013 Jul 18.

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