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Items: 1 to 20 of 24

1.

Lignin Valorization: Two Hybrid Biochemical Routes for the Conversion of Polymeric Lignin into Value-added Chemicals.

Wu W, Dutta T, Varman AM, Eudes A, Manalansan B, Loqué D, Singh S.

Sci Rep. 2017 Aug 21;7(1):8420. doi: 10.1038/s41598-017-07895-1.

2.

Common origin of methylenedioxy ring degradation and demethylation in bacteria.

Takeda H, Ishikawa K, Yoshida H, Kasai D, Wakana D, Fukuda M, Sato F, Hosoe T.

Sci Rep. 2017 Aug 7;7(1):7422. doi: 10.1038/s41598-017-07370-x.

3.

Structure of aryl O-demethylase offers molecular insight into a catalytic tyrosine-dependent mechanism.

Kohler AC, Mills MJL, Adams PD, Simmons BA, Sale KL.

Proc Natl Acad Sci U S A. 2017 Apr 18;114(16):E3205-E3214. doi: 10.1073/pnas.1619263114. Epub 2017 Apr 3.

4.

Overcoming a hemihedral twinning problem in tetrahydrofolate-dependent O-demethylase crystals by the microseeding method.

Harada A, Sato Y, Kamimura N, Venugopalan N, Masai E, Senda T.

Acta Crystallogr F Struct Biol Commun. 2016 Dec 1;72(Pt 12):897-902. Epub 2016 Nov 30.

PMID:
27917838
5.

Decoding how a soil bacterium extracts building blocks and metabolic energy from ligninolysis provides road map for lignin valorization.

Varman AM, He L, Follenfant R, Wu W, Wemmer S, Wrobel SA, Tang YJ, Singh S.

Proc Natl Acad Sci U S A. 2016 Oct 4;113(40):E5802-E5811. Epub 2016 Sep 15.

6.

Discovery of a sesamin-metabolizing microorganism and a new enzyme.

Kumano T, Fujiki E, Hashimoto Y, Kobayashi M.

Proc Natl Acad Sci U S A. 2016 Aug 9;113(32):9087-92. doi: 10.1073/pnas.1605050113. Epub 2016 Jul 21.

7.

A Tetrahydrofolate-Dependent Methyltransferase Catalyzing the Demethylation of Dicamba in Sphingomonas sp. Strain Ndbn-20.

Yao L, Yu LL, Zhang JJ, Xie XT, Tao Q, Yan X, Hong Q, Qiu JG, He J, Ding DR.

Appl Environ Microbiol. 2016 Aug 30;82(18):5621-30. doi: 10.1128/AEM.01201-16. Print 2016 Sep 15.

8.

Methanogenic degradation of lignin-derived monoaromatic compounds by microbial enrichments from rice paddy field soil.

Kato S, Chino K, Kamimura N, Masai E, Yumoto I, Kamagata Y.

Sci Rep. 2015 Sep 24;5:14295. doi: 10.1038/srep14295.

9.

Phylogenetic and kinetic characterization of a suite of dehydrogenases from a newly isolated bacterium, strain SG61-1L, that catalyze the turnover of guaiacylglycerol-β-guaiacyl ether stereoisomers.

Palamuru S, Dellas N, Pearce SL, Warden AC, Oakeshott JG, Pandey G.

Appl Environ Microbiol. 2015 Dec;81(23):8164-76. doi: 10.1128/AEM.01573-15. Epub 2015 Sep 18.

10.

Membrane-associated glucose-methanol-choline oxidoreductase family enzymes PhcC and PhcD are essential for enantioselective catabolism of dehydrodiconiferyl alcohol.

Takahashi K, Hirose Y, Kamimura N, Hishiyama S, Hara H, Araki T, Kasai D, Kajita S, Katayama Y, Fukuda M, Masai E.

Appl Environ Microbiol. 2015 Dec;81(23):8022-36. doi: 10.1128/AEM.02391-15. Epub 2015 Sep 11.

11.

Aerobic biodegradation of 2,4-Dinitroanisole by Nocardioides sp. strain JS1661.

Fida TT, Palamuru S, Pandey G, Spain JC.

Appl Environ Microbiol. 2014 Dec;80(24):7725-31. doi: 10.1128/AEM.02752-14. Epub 2014 Oct 3.

12.

Three-Component O-Demethylase System Essential for Catabolism of a Lignin-Derived Biphenyl Compound in Sphingobium sp. Strain SYK-6.

Yoshikata T, Suzuki K, Kamimura N, Namiki M, Hishiyama S, Araki T, Kasai D, Otsuka Y, Nakamura M, Fukuda M, Katayama Y, Masai E.

Appl Environ Microbiol. 2014 Dec;80(23):7142-53. doi: 10.1128/AEM.02236-14. Epub 2014 Sep 12.

13.

Biochemistry and occurrence of o-demethylation in plant metabolism.

Hagel JM, Facchini PJ.

Front Physiol. 2010 Jul 15;1:14. doi: 10.3389/fphys.2010.00014. eCollection 2010.

14.

Characterization of the protocatechuate 4,5-cleavage pathway operon in Comamonas sp. strain E6 and discovery of a novel pathway gene.

Kamimura N, Aoyama T, Yoshida R, Takahashi K, Kasai D, Abe T, Mase K, Katayama Y, Fukuda M, Masai E.

Appl Environ Microbiol. 2010 Dec;76(24):8093-101. doi: 10.1128/AEM.01863-10. Epub 2010 Oct 15.

15.

Transcriptional regulation of the terephthalate catabolism operon in Comamonas sp. strain E6.

Kasai D, Kitajima M, Fukuda M, Masai E.

Appl Environ Microbiol. 2010 Sep;76(18):6047-55. doi: 10.1128/AEM.00742-10. Epub 2010 Jul 23.

16.

Regulatory system of the protocatechuate 4,5-cleavage pathway genes essential for lignin downstream catabolism.

Kamimura N, Takamura K, Hara H, Kasai D, Natsume R, Senda T, Katayama Y, Fukuda M, Masai E.

J Bacteriol. 2010 Jul;192(13):3394-405. doi: 10.1128/JB.00215-10. Epub 2010 Apr 30.

17.

Evidence that ubiquinone is a required intermediate for rhodoquinone biosynthesis in Rhodospirillum rubrum.

Brajcich BC, Iarocci AL, Johnstone LA, Morgan RK, Lonjers ZT, Hotchko MJ, Muhs JD, Kieffer A, Reynolds BJ, Mandel SM, Marbois BN, Clarke CF, Shepherd JN.

J Bacteriol. 2010 Jan;192(2):436-45. doi: 10.1128/JB.01040-09. Epub 2009 Nov 20.

18.

Characterization of the isophthalate degradation genes of Comamonas sp. strain E6.

Fukuhara Y, Inakazu K, Kodama N, Kamimura N, Kasai D, Katayama Y, Fukuda M, Masai E.

Appl Environ Microbiol. 2010 Jan;76(2):519-27. doi: 10.1128/AEM.01270-09. Epub 2009 Nov 20.

19.

Uncovering the protocatechuate 2,3-cleavage pathway genes.

Kasai D, Fujinami T, Abe T, Mase K, Katayama Y, Fukuda M, Masai E.

J Bacteriol. 2009 Nov;191(21):6758-68. doi: 10.1128/JB.00840-09. Epub 2009 Aug 28.

20.

Catalysis of methyl group transfers involving tetrahydrofolate and B(12).

Ragsdale SW.

Vitam Horm. 2008;79:293-324. doi: 10.1016/S0083-6729(08)00410-X. Review.

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