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Items: 1 to 20 of 28


A high-density consensus linkage map of white lupin highlights synteny with narrow-leafed lupin and provides markers tagging key agronomic traits.

Książkiewicz M, Nazzicari N, Yang H, Nelson MN, Renshaw D, Rychel S, Ferrari B, Carelli M, Tomaszewska M, Stawiński S, Naganowska B, Wolko B, Annicchiarico P.

Sci Rep. 2017 Nov 10;7(1):15335. doi: 10.1038/s41598-017-15625-w.


qPrimerDB: a thermodynamics-based gene-specific qPCR primer database for 147 organisms.

Lu K, Li T, He J, Chang W, Zhang R, Liu M, Yu M, Fan Y, Ma J, Sun W, Qu C, Liu L, Li N, Liang Y, Wang R, Qian W, Tang Z, Xu X, Lei B, Zhang K, Li J.

Nucleic Acids Res. 2018 Jan 4;46(D1):D1229-D1236. doi: 10.1093/nar/gkx725.


ROOT DETERMINED NODULATION1 Is Required for M. truncatula CLE12, But Not CLE13, Peptide Signaling through the SUNN Receptor Kinase.

Kassaw T, Nowak S, Schnabel E, Frugoli J.

Plant Physiol. 2017 Aug;174(4):2445-2456. doi: 10.1104/pp.17.00278. Epub 2017 Jun 7.


QTLomics in Soybean: A Way Forward for Translational Genomics and Breeding.

Kumawat G, Gupta S, Ratnaparkhe MB, Maranna S, Satpute GK.

Front Plant Sci. 2016 Dec 21;7:1852. doi: 10.3389/fpls.2016.01852. eCollection 2016. Review.


Lotus Base: An integrated information portal for the model legume Lotus japonicus.

Mun T, Bachmann A, Gupta V, Stougaard J, Andersen SU.

Sci Rep. 2016 Dec 23;6:39447. doi: 10.1038/srep39447.


LegumeIP 2.0--a platform for the study of gene function and genome evolution in legumes.

Li J, Dai X, Zhuang Z, Zhao PX.

Nucleic Acids Res. 2016 Jan 4;44(D1):D1189-94. doi: 10.1093/nar/gkv1237. Epub 2015 Nov 17.


Legume information system ( a key component of a set of federated data resources for the legume family.

Dash S, Campbell JD, Cannon EK, Cleary AM, Huang W, Kalberer SR, Karingula V, Rice AG, Singh J, Umale PE, Weeks NT, Wilkey AP, Farmer AD, Cannon SB.

Nucleic Acids Res. 2016 Jan 4;44(D1):D1181-8. doi: 10.1093/nar/gkv1159. Epub 2015 Nov 5.


Naturally occurring diversity helps to reveal genes of adaptive importance in legumes.

Gentzbittel L, Andersen SU, Ben C, Rickauer M, Stougaard J, Young ND.

Front Plant Sci. 2015 Apr 21;6:269. doi: 10.3389/fpls.2015.00269. eCollection 2015.


The chickpea genomic web resource: visualization and analysis of the desi-type Cicer arietinum nuclear genome for comparative exploration of legumes.

Misra G, Priya P, Bandhiwal N, Bareja N, Jain M, Bhatia S, Chattopadhyay D, Tyagi AK, Yadav G.

BMC Plant Biol. 2014 Dec 18;14:315. doi: 10.1186/s12870-014-0315-2.


Genomics-assisted breeding in four major pulse crops of developing countries: present status and prospects.

Bohra A, Pandey MK, Jha UC, Singh B, Singh IP, Datta D, Chaturvedi SK, Nadarajan N, Varshney RK.

Theor Appl Genet. 2014 Jun;127(6):1263-91. doi: 10.1007/s00122-014-2301-3. Epub 2014 Apr 8. Review.


Silicon era of carbon-based life: application of genomics and bioinformatics in crop stress research.

Li MW, Qi X, Ni M, Lam HM.

Int J Mol Sci. 2013 May 29;14(6):11444-83. doi: 10.3390/ijms140611444. Review.


PGDD: a database of gene and genome duplication in plants.

Lee TH, Tang H, Wang X, Paterson AH.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1152-8. doi: 10.1093/nar/gks1104. Epub 2012 Nov 24.


Positional cloning and characterization reveal the molecular basis for soybean maturity locus E1 that regulates photoperiodic flowering.

Xia Z, Watanabe S, Yamada T, Tsubokura Y, Nakashima H, Zhai H, Anai T, Sato S, Yamazaki T, Lü S, Wu H, Tabata S, Harada K.

Proc Natl Acad Sci U S A. 2012 Aug 7;109(32):E2155-64. doi: 10.1073/pnas.1117982109. Epub 2012 May 22.


LegumeIP: an integrative database for comparative genomics and transcriptomics of model legumes.

Li J, Dai X, Liu T, Zhao PX.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1221-9. doi: 10.1093/nar/gkr939. Epub 2011 Nov 21.


Phytozome: a comparative platform for green plant genomics.

Goodstein DM, Shu S, Howson R, Neupane R, Hayes RD, Fazo J, Mitros T, Dirks W, Hellsten U, Putnam N, Rokhsar DS.

Nucleic Acids Res. 2012 Jan;40(Database issue):D1178-86. doi: 10.1093/nar/gkr944. Epub 2011 Nov 22.


Applications and methods utilizing the Simple Semantic Web Architecture and Protocol (SSWAP) for bioinformatics resource discovery and disparate data and service integration.

Nelson RT, Avraham S, Shoemaker RC, May GD, Ware D, Gessler DD.

BioData Min. 2010 Jun 4;3(1):3. doi: 10.1186/1756-0381-3-3.


Single strand conformation polymorphism based SNP and Indel markers for genetic mapping and synteny analysis of common bean (Phaseolus vulgaris L.).

Galeano CH, Fernández AC, Gómez M, Blair MW.

BMC Genomics. 2009 Dec 23;10:629. doi: 10.1186/1471-2164-10-629.


An expression database for roots of the model legume Medicago truncatula under salt stress.

Li D, Su Z, Dong J, Wang T.

BMC Genomics. 2009 Nov 11;10:517. doi: 10.1186/1471-2164-10-517.


A single gene, AIN, in Medicago truncatula mediates a hypersensitive response to both bluegreen aphid and pea aphid, but confers resistance only to bluegreen aphid.

Klingler JP, Nair RM, Edwards OR, Singh KB.

J Exp Bot. 2009;60(14):4115-27. doi: 10.1093/jxb/erp244. Epub 2009 Aug 18.


Multiple models for Rosaceae genomics.

Shulaev V, Korban SS, Sosinski B, Abbott AG, Aldwinckle HS, Folta KM, Iezzoni A, Main D, Arús P, Dandekar AM, Lewers K, Brown SK, Davis TM, Gardiner SE, Potter D, Veilleux RE.

Plant Physiol. 2008 Jul;147(3):985-1003. doi: 10.1104/pp.107.115618. Epub 2008 May 16. Review.

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