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Items: 1 to 20 of 109


The Importance of Endophenotypes to Evaluate the Relationship between Genotype and External Phenotype.

Te Pas MF, Madsen O, Calus MP, Smits MA.

Int J Mol Sci. 2017 Feb 22;18(2). pii: E472. doi: 10.3390/ijms18020472. Review.


Chicken (Gallus gallus) endogenous retrovirus generates genomic variations in the chicken genome.

Lee J, Mun S, Kim DH, Cho CS, Oh DY, Han K.

Mob DNA. 2017 Jan 24;8:2. doi: 10.1186/s13100-016-0085-5. eCollection 2017 Jan 24.


Integrating Genomic Data Sets for Knowledge Discovery: An Informed Approach to Management of Captive Endangered Species.

Irizarry KJ, Bryant D, Kalish J, Eng C, Schmidt PL, Barrett G, Barr MC.

Int J Genomics. 2016;2016:2374610. doi: 10.1155/2016/2374610. Epub 2016 Jun 8. Review.


Genetic features of red and green junglefowls and relationship with Indonesian native chickens Sumatera and Kedu Hitam.

Ulfah M, Kawahara-Miki R, Farajalllah A, Muladno M, Dorshorst B, Martin A, Kono T.

BMC Genomics. 2016 May 4;17:320. doi: 10.1186/s12864-016-2652-z.


Parallel Selection Revealed by Population Sequencing in Chicken.

Qanbari S, Seidel M, Strom TM, Mayer KF, Preisinger R, Simianer H.

Genome Biol Evol. 2015 Nov 13;7(12):3299-306. doi: 10.1093/gbe/evv222.


Association of Apolipoprotein B and Adiponectin Receptor 1 Genes with Carcass, Bone Integrity and Performance Traits in a Paternal Broiler Line.

da Cruz VA, Schenkel FS, Savegnago RP, Grupioni NV, Stafuzza NB, Sargolzaei M, Ibelli AM, Peixoto Jde O, Ledur MC, Munari DP.

PLoS One. 2015 Aug 31;10(8):e0136824. doi: 10.1371/journal.pone.0136824. eCollection 2015 Aug 31.


An Efficient Genotyping Method in Chicken Based on Genome Reducing and Sequencing.

Liao R, Wang Z, Chen Q, Tu Y, Chen Z, Wang Q, Yang C, Zhang X, Pan Y.

PLoS One. 2015 Aug 27;10(8):e0137010. doi: 10.1371/journal.pone.0137010. eCollection 2015 Aug 27.


Detection and characterization of small insertion and deletion genetic variants in modern layer chicken genomes.

Boschiero C, Gheyas AA, Ralph HK, Eory L, Paton B, Kuo R, Fulton J, Preisinger R, Kaiser P, Burt DW.

BMC Genomics. 2015 Jul 31;16:562. doi: 10.1186/s12864-015-1711-1.


Expanding Duplication of Free Fatty Acid Receptor-2 (GPR43) Genes in the Chicken Genome.

Meslin C, Desert C, Callebaut I, Djari A, Klopp C, Pitel F, Leroux S, Martin P, Froment P, Guilbert E, Gondret F, Lagarrigue S, Monget P.

Genome Biol Evol. 2015 Apr 24;7(5):1332-48. doi: 10.1093/gbe/evv072.


A genomic duplication is associated with ectopic eomesodermin expression in the embryonic chicken comb and two duplex-comb phenotypes.

Dorshorst B, Harun-Or-Rashid M, Bagherpoor AJ, Rubin CJ, Ashwell C, Gourichon D, Tixier-Boichard M, Hallböök F, Andersson L.

PLoS Genet. 2015 Mar 19;11(3):e1004947. doi: 10.1371/journal.pgen.1004947. eCollection 2015 Mar 19.


Genome-wide mapping reveals conservation of promoter DNA methylation following chicken domestication.

Li Q, Wang Y, Hu X, Zhao Y, Li N.

Sci Rep. 2015 Mar 4;5:8748. doi: 10.1038/srep08748.


Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation.

Roux PF, Boitard S, Blum Y, Parks B, Montagner A, Mouisel E, Djari A, Esquerré D, Désert C, Boutin M, Leroux S, Lecerf F, Le Bihan-Duval E, Klopp C, Servin B, Pitel F, Duclos MJ, Guillou H, Lusis AJ, Demeure O, Lagarrigue S.

G3 (Bethesda). 2015 Feb 3;5(4):517-29. doi: 10.1534/g3.115.016865.


Quantifying realized inbreeding in wild and captive animal populations.

Knief U, Hemmrich-Stanisak G, Wittig M, Franke A, Griffith SC, Kempenaers B, Forstmeier W.

Heredity (Edinb). 2015 Apr;114(4):397-403. doi: 10.1038/hdy.2014.116. Epub 2015 Jan 14.


Genome-wide candidate regions for selective sweeps revealed through massive parallel sequencing of DNA across ten turkey populations.

Aslam ML, Bastiaansen JW, Megens HJ, Crooijmans RP, Nasreen F, Blomberg le A, Van Tassell CP, Sonstegard TS, Schroeder SG, Groenen MA, Long JA.

BMC Genet. 2014 Nov 25;15:117. doi: 10.1186/s12863-014-0117-4.


A novel gain-of-function mutation of the proneural IRX1 and IRX2 genes disrupts axis elongation in the Araucana rumpless chicken.

Freese NH, Lam BA, Staton M, Scott A, Chapman SC.

PLoS One. 2014 Nov 5;9(11):e112364. doi: 10.1371/journal.pone.0112364. eCollection 2014 Nov 5.


The genome of the chicken DT40 bursal lymphoma cell line.

Molnár J, Póti Á, Pipek O, Krzystanek M, Kanu N, Swanton C, Tusnády GE, Szallasi Z, Csabai I, Szüts D.

G3 (Bethesda). 2014 Sep 15;4(11):2231-40. doi: 10.1534/g3.114.013482.


Targeted gene knockout in chickens mediated by TALENs.

Park TS, Lee HJ, Kim KH, Kim JS, Han JY.

Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):12716-21. doi: 10.1073/pnas.1410555111. Epub 2014 Aug 19.


Genome-wide characterization of insertion and deletion variation in chicken using next generation sequencing.

Yan Y, Yi G, Sun C, Qu L, Yang N.

PLoS One. 2014 Aug 18;9(8):e104652. doi: 10.1371/journal.pone.0104652. eCollection 2014 Aug 18.


An approach to identify SNPs in the gene encoding acetyl-CoA acetyltransferase-2 (ACAT-2) and their proposed role in metabolic processes in pig.

Sodhi SS, Ghosh M, Song KD, Sharma N, Kim JH, Kim NE, Lee SJ, Kang CW, Oh SJ, Jeong DK.

PLoS One. 2014 Jul 22;9(7):e102432. doi: 10.1371/journal.pone.0102432. eCollection 2014 Jul 22.


Genetic diversity of myanmar and indonesia native chickens together with two jungle fowl species by using 102 indels polymorphisms.

Maw AA, Shimogiri T, Riztyan, Kawabe K, Kawamoto Y, Okamoto S.

Asian-Australas J Anim Sci. 2012 Jul;25(7):927-34. doi: 10.5713/ajas.2011.11511.

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