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Items: 1 to 20 of 123


Petri Net-Based Model of Helicobacter pylori Mediated Disruption of Tight Junction Proteins in Stomach Lining during Gastric Carcinoma.

Naz A, Obaid A, Awan FM, Ikram A, Ahmad J, Ali A.

Front Microbiol. 2017 Sep 6;8:1682. doi: 10.3389/fmicb.2017.01682. eCollection 2017.


PhosphoPredict: A bioinformatics tool for prediction of human kinase-specific phosphorylation substrates and sites by integrating heterogeneous feature selection.

Song J, Wang H, Wang J, Leier A, Marquez-Lago T, Yang B, Zhang Z, Akutsu T, Webb GI, Daly RJ.

Sci Rep. 2017 Jul 31;7(1):6862. doi: 10.1038/s41598-017-07199-4.


Prediction of post-translational modification sites using multiple kernel support vector machine.

Wang B, Wang M, Li A.

PeerJ. 2017 Apr 27;5:e3261. doi: 10.7717/peerj.3261. eCollection 2017.


The T-LAK Cell-originated Protein Kinase Signal Pathway Promotes Colorectal Cancer Metastasis.

Zykova TA, Zhu F, Wang L, Li H, Bai R, Lim DY, Yao K, Bode AM, Dong Z.

EBioMedicine. 2017 Apr;18:73-82. doi: 10.1016/j.ebiom.2017.04.003. Epub 2017 Apr 6.


Interrogating the hidden phosphoproteome.

Kang UB, Alexander WM, Marto JA.

Proteomics. 2017 Mar;17(6). doi: 10.1002/pmic.201600437.


Unraveling Kinase Activation Dynamics Using Kinase-Substrate Relationships from Temporal Large-Scale Phosphoproteomics Studies.

Domanova W, Krycer J, Chaudhuri R, Yang P, Vafaee F, Fazakerley D, Humphrey S, James D, Kuncic Z.

PLoS One. 2016 Jun 23;11(6):e0157763. doi: 10.1371/journal.pone.0157763. eCollection 2016. Erratum in: PLoS One. 2017 Sep 28;12 (9):e0185871.


The end of a monolith: Deconstructing the Cnn-Polo interaction.

Eisman RC, Phelps MA, Kaufman TC.

Fly (Austin). 2016 Apr 2;10(2):60-72. doi: 10.1080/19336934.2016.1178419. Epub 2016 Apr 20.


Phosphorylation of TOPK at Y74, Y272 by Src increases the stability of TOPK and promotes tumorigenesis of colon.

Xiao J, Duan Q, Wang Z, Yan W, Sun H, Xue P, Fan X, Zeng X, Chen J, Shao C, Zhu F.

Oncotarget. 2016 Apr 26;7(17):24483-94. doi: 10.18632/oncotarget.8231.


dbPAF: an integrative database of protein phosphorylation in animals and fungi.

Ullah S, Lin S, Xu Y, Deng W, Ma L, Zhang Y, Liu Z, Xue Y.

Sci Rep. 2016 Mar 24;6:23534. doi: 10.1038/srep23534.


Regulation of lamin properties and functions: does phosphorylation do it all?

Machowska M, Piekarowicz K, Rzepecki R.

Open Biol. 2015 Nov;5(11). pii: 150094. doi: 10.1098/rsob.150094. Review.


Advances in computational approaches for prioritizing driver mutations and significantly mutated genes in cancer genomes.

Cheng F, Zhao J, Zhao Z.

Brief Bioinform. 2016 Jul;17(4):642-56. doi: 10.1093/bib/bbv068. Epub 2015 Aug 24.


Mapping of the Sequences Directing Localization of the Drosophila Germ Cell-Expressed Protein (GCE).

Greb-Markiewicz B, Sadowska D, Surgut N, Godlewski J, Zarębski M, Ożyhar A.

PLoS One. 2015 Jul 17;10(7):e0133307. doi: 10.1371/journal.pone.0133307. eCollection 2015.


Study of phosphorylation events for cancer diagnoses and treatment.

López Villar E, Madero L, A López-Pascual J, C Cho W.

Clin Transl Med. 2015 Dec;4(1):59. doi: 10.1186/s40169-015-0059-0. Epub 2015 May 24.


Alternate Phosphorylation/O-GlcNAc Modification on Human Insulin IRSs: A Road towards Impaired Insulin Signaling in Alzheimer and Diabetes.

Jahangir Z, Ahmad W, Shabbiri K.

Adv Bioinformatics. 2014;2014:324753. doi: 10.1155/2014/324753. Epub 2014 Dec 17.


Computational methods and opportunities for phosphorylation network medicine.

Chen YA, Eschrich SA.

Transl Cancer Res. 2014 Jun 1;3(3):266-278.


Intrinsically disordered and pliable Starmaker-like protein from medaka (Oryzias latipes) controls the formation of calcium carbonate crystals.

Różycka M, Wojtas M, Jakób M, Stigloher C, Grzeszkowiak M, Mazur M, Ożyhar A.

PLoS One. 2014 Dec 9;9(12):e114308. doi: 10.1371/journal.pone.0114308. eCollection 2014. Erratum in: PLoS One. 2015;10(3):e0119969.


Computational phosphoproteomics: from identification to localization.

Lee DC, Jones AR, Hubbard SJ.

Proteomics. 2015 Mar;15(5-6):950-63. doi: 10.1002/pmic.201400372. Epub 2015 Feb 17. Review.


Lean Big Data integration in systems biology and systems pharmacology.

Ma'ayan A, Rouillard AD, Clark NR, Wang Z, Duan Q, Kou Y.

Trends Pharmacol Sci. 2014 Sep;35(9):450-60. doi: 10.1016/ Epub 2014 Aug 7.

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