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Items: 11

1.

Loss of the Yeast SR Protein Npl3 Alters Gene Expression Due to Transcription Readthrough.

Holmes RK, Tuck AC, Zhu C, Dunn-Davies HR, Kudla G, Clauder-Munster S, Granneman S, Steinmetz LM, Guthrie C, Tollervey D.

PLoS Genet. 2015 Dec 22;11(12):e1005735. doi: 10.1371/journal.pgen.1005735. eCollection 2015 Dec.

2.

Widespread alternative and aberrant splicing revealed by lariat sequencing.

Stepankiw N, Raghavan M, Fogarty EA, Grimson A, Pleiss JA.

Nucleic Acids Res. 2015 Sep 30;43(17):8488-501. doi: 10.1093/nar/gkv763. Epub 2015 Aug 10.

3.

Genetic variability and evolutionary implications of RNA silencing suppressor genes in RNA1 of sweet potato chlorotic stunt virus isolates infecting sweetpotato and related wild species.

Tugume AK, Amayo R, Weinheimer I, Mukasa SB, Rubaihayo PR, Valkonen JP.

PLoS One. 2013 Nov 22;8(11):e81479. doi: 10.1371/journal.pone.0081479. eCollection 2013.

4.

Recognition modes of RNA tetraloops and tetraloop-like motifs by RNA-binding proteins.

Thapar R, Denmon AP, Nikonowicz EP.

Wiley Interdiscip Rev RNA. 2014 Jan-Feb;5(1):49-67. doi: 10.1002/wrna.1196. Epub 2013 Oct 3. Review.

5.

Genes come and go: the evolutionarily plastic path of budding yeast RNase III enzymes.

Bernstein DA, Vyas VK, Fink GR.

RNA Biol. 2012 Sep;9(9):1123-8. doi: 10.4161/rna.21360. Epub 2012 Sep 1. Review.

6.

RNA recognition by double-stranded RNA binding domains: a matter of shape and sequence.

Masliah G, Barraud P, Allain FH.

Cell Mol Life Sci. 2013 Jun;70(11):1875-95. doi: 10.1007/s00018-012-1119-x. Epub 2012 Aug 24. Review.

7.

RNA aptamers binding the double-stranded RNA-binding domain.

Hallegger M, Taschner A, Jantsch MF.

RNA. 2006 Nov;12(11):1993-2004. Epub 2006 Sep 25.

8.

Biochemical and genomic analysis of substrate recognition by the double-stranded RNA binding domain of yeast RNase III.

Henras AK, Sam M, Hiley SL, Wu H, Hughes TR, Feigon J, Chanfreau GF.

RNA. 2005 Aug;11(8):1225-37. Epub 2005 Jun 29.

9.
10.

Structural basis for recognition of the AGNN tetraloop RNA fold by the double-stranded RNA-binding domain of Rnt1p RNase III.

Wu H, Henras A, Chanfreau G, Feigon J.

Proc Natl Acad Sci U S A. 2004 Jun 1;101(22):8307-12. Epub 2004 May 18.

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