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Breakpoint mapping and haplotype analysis of translocation t(1;12)(q43;q21.1) in two apparently independent families with vascular phenotypes.

Luukkonen TM, Mehrjouy MM, Pöyhönen M, Anttonen AK, Lahermo P, Ellonen P, Paulin L, Tommerup N, Palotie A, Varilo T.

Mol Genet Genomic Med. 2018 Jan;6(1):56-68. doi: 10.1002/mgg3.346. Epub 2017 Nov 23.


Human Accelerated Regions and Other Human-Specific Sequence Variations in the Context of Evolution and Their Relevance for Brain Development.

Levchenko A, Kanapin A, Samsonova A, Gainetdinov RR.

Genome Biol Evol. 2018 Jan 1;10(1):166-188. doi: 10.1093/gbe/evx240.


Analysis of Copy Number Variation in the Abp Gene Regions of Two House Mouse Subspecies Suggests Divergence during the Gene Family Expansions.

Pezer Ž, Chung AG, Karn RC, Laukaitis CM.

Genome Biol Evol. 2017 Jun 1;9(6). doi: 10.1093/gbe/evx099.


Transposable Elements in Human Cancer: Causes and Consequences of Deregulation.

Anwar SL, Wulaningsih W, Lehmann U.

Int J Mol Sci. 2017 May 4;18(5). pii: E974. doi: 10.3390/ijms18050974. Review.


Expressed Structurally-stable Inverted Duplicates in Mammalian Genomes as Functional Noncoding Elements.

Chen ZX, Oliver B, Zhang YE, Gao G, Long M.

Genome Biol Evol. 2017 Mar 13. doi: 10.1093/gbe/evx054. [Epub ahead of print]


The ace-1 Locus Is Amplified in All Resistant Anopheles gambiae Mosquitoes: Fitness Consequences of Homogeneous and Heterogeneous Duplications.

Assogba BS, Milesi P, Djogbénou LS, Berthomieu A, Makoundou P, Baba-Moussa LS, Fiston-Lavier AS, Belkhir K, Labbé P, Weill M.

PLoS Biol. 2016 Dec 5;14(12):e2000618. doi: 10.1371/journal.pbio.2000618. eCollection 2016 Dec.


Functions and Malfunctions of Mammalian DNA-Cytosine Deaminases.

Siriwardena SU, Chen K, Bhagwat AS.

Chem Rev. 2016 Oct 26;116(20):12688-12710. doi: 10.1021/acs.chemrev.6b00296. Epub 2016 Sep 1. Review.


The Role of Retrotransposons in Gene Family Expansions in the Human and Mouse Genomes.

Janoušek V, Laukaitis CM, Yanchukov A, Karn RC.

Genome Biol Evol. 2016 Sep 4;8(9):2632-50. doi: 10.1093/gbe/evw192.


Variant discovery and breakpoint region prediction for studying the human 22q11.2 deletion using BAC clone and whole genome sequencing analysis.

Guo X, Delio M, Haque N, Castellanos R, Hestand MS, Vermeesch JR, Morrow BE, Zheng D.

Hum Mol Genet. 2016 Sep 1;25(17):3754-3767. doi: 10.1093/hmg/ddw221. Epub 2016 Jul 19.


Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen.

Faino L, Seidl MF, Shi-Kunne X, Pauper M, van den Berg GC, Wittenberg AH, Thomma BP.

Genome Res. 2016 Aug;26(8):1091-100. doi: 10.1101/gr.204974.116. Epub 2016 Jun 20.


Evolution of Gene Duplication in Plants.

Panchy N, Lehti-Shiu M, Shiu SH.

Plant Physiol. 2016 Aug;171(4):2294-316. doi: 10.1104/pp.16.00523. Epub 2016 Jun 10. Review.


Heavy Metal Exposure Influences Double Strand Break DNA Repair Outcomes.

Morales ME, Derbes RS, Ade CM, Ortego JC, Stark J, Deininger PL, Roy-Engel AM.

PLoS One. 2016 Mar 11;11(3):e0151367. doi: 10.1371/journal.pone.0151367. eCollection 2016.


Alu elements and DNA double-strand break repair.

White TB, Morales ME, Deininger PL.

Mob Genet Elements. 2015 Nov 5;5(6):81-85. eCollection 2015 Nov-Dec.


Bovine NK-lysin: Copy number variation and functional diversification.

Chen J, Huddleston J, Buckley RM, Malig M, Lawhon SD, Skow LC, Lee MO, Eichler EE, Andersson L, Womack JE.

Proc Natl Acad Sci U S A. 2015 Dec 29;112(52):E7223-9. doi: 10.1073/pnas.1519374113. Epub 2015 Dec 14.


Early evolutionary history and genomic features of gene duplicates in the human genome.

Bu L, Katju V.

BMC Genomics. 2015 Aug 20;16:621. doi: 10.1186/s12864-015-1827-3.


The contribution of alu elements to mutagenic DNA double-strand break repair.

Morales ME, White TB, Streva VA, DeFreece CB, Hedges DJ, Deininger PL.

PLoS Genet. 2015 Mar 11;11(3):e1005016. doi: 10.1371/journal.pgen.1005016. eCollection 2015 Mar.


Transposable element islands facilitate adaptation to novel environments in an invasive species.

Schrader L, Kim JW, Ence D, Zimin A, Klein A, Wyschetzki K, Weichselgartner T, Kemena C, Stökl J, Schultner E, Wurm Y, Smith CD, Yandell M, Heinze J, Gadau J, Oettler J.

Nat Commun. 2014 Dec 16;5:5495. doi: 10.1038/ncomms6495.


Transposition-mediated DNA re-replication in maize.

Zhang J, Zuo T, Wang D, Peterson T.

Elife. 2014 Nov 18;3:e03724. doi: 10.7554/eLife.03724.


Multiple Mechanisms Contribute To Telomere Maintenance.

Morrish TA, Bekbolysnov D, Velliquette D, Morgan M, Ross B, Wang Y, Chaney B, McQuigg J, Fager N, Maine IP.

J Cancer Biol Res. 2013 Nov 19;1(3). pii: 1012.


LINEs and SINEs of primate evolution.

Konkel MK, Walker JA, Batzer MA.

Evol Anthropol. 2010 Nov 1;19(6):236-249. No abstract available.

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