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Items: 1 to 20 of 164

1.

Duplicates, redundancies and inconsistencies in the primary nucleotide databases: a descriptive study.

Chen Q, Zobel J, Verspoor K.

Database (Oxford). 2017 Jan 10;2017. pii: baw163. doi: 10.1093/database/baw163. Print 2017.

2.

Isolation of Alcohol Dehydrogenase cDNA and Basal Regulatory Region from Metroxylon sagu.

Wee CC, Roslan HA.

ISRN Mol Biol. 2012 Aug 26;2012:839427. doi: 10.5402/2012/839427. eCollection 2012.

3.

Exploration of the Drosophila buzzatii transposable element content suggests underestimation of repeats in Drosophila genomes.

Rius N, Guillén Y, Delprat A, Kapusta A, Feschotte C, Ruiz A.

BMC Genomics. 2016 May 10;17:344. doi: 10.1186/s12864-016-2648-8.

4.

Identification and Validation of Novel Hedgehog-Responsive Enhancers Predicted by Computational Analysis of Ci/Gli Binding Site Density.

Gurdziel K, Lorberbaum DS, Udager AM, Song JY, Richards N, Parker DS, Johnson LA, Allen BL, Barolo S, Gumucio DL.

PLoS One. 2015 Dec 28;10(12):e0145225. doi: 10.1371/journal.pone.0145225. eCollection 2015.

5.

Pathogenic and likely pathogenic variant prevalence among the first 10,000 patients referred for next-generation cancer panel testing.

Susswein LR, Marshall ML, Nusbaum R, Vogel Postula KJ, Weissman SM, Yackowski L, Vaccari EM, Bissonnette J, Booker JK, Cremona ML, Gibellini F, Murphy PD, Pineda-Alvarez DE, Pollevick GD, Xu Z, Richard G, Bale S, Klein RT, Hruska KS, Chung WK.

Genet Med. 2016 Aug;18(8):823-32. doi: 10.1038/gim.2015.166. Epub 2015 Dec 17.

6.

Genetics on the Fly: A Primer on the Drosophila Model System.

Hales KG, Korey CA, Larracuente AM, Roberts DM.

Genetics. 2015 Nov;201(3):815-42. doi: 10.1534/genetics.115.183392.

7.

Cnidaria: fast, reference-free clustering of raw and assembled genome and transcriptome NGS data.

Aflitos SA, Severing E, Sanchez-Perez G, Peters S, de Jong H, de Ridder D.

BMC Bioinformatics. 2015 Nov 2;16:352. doi: 10.1186/s12859-015-0806-7.

8.

Dynamics of Wolbachia pipientis Gene Expression Across the Drosophila melanogaster Life Cycle.

Gutzwiller F, Carmo CR, Miller DE, Rice DW, Newton IL, Hawley RS, Teixeira L, Bergman CM.

G3 (Bethesda). 2015 Oct 23;5(12):2843-56. doi: 10.1534/g3.115.021931.

9.

The lysosomal enzyme receptor protein (LERP) is not essential, but is implicated in lysosomal function in Drosophila melanogaster.

Hasanagic M, van Meel E, Luan S, Aurora R, Kornfeld S, Eissenberg JC.

Biol Open. 2015 Sep 24;4(10):1316-25. doi: 10.1242/bio.013334.

10.

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM; FlyBase Consortium..

G3 (Bethesda). 2015 Jun 24;5(8):1737-49. doi: 10.1534/g3.115.018937.

11.

Long-read, whole-genome shotgun sequence data for five model organisms.

Kim KE, Peluso P, Babayan P, Yeadon PJ, Yu C, Fisher WW, Chin CS, Rapicavoli NA, Rank DR, Li J, Catcheside DE, Celniker SE, Phillippy AM, Bergman CM, Landolin JM.

Sci Data. 2014 Nov 25;1:140045. doi: 10.1038/sdata.2014.45. eCollection 2014.

12.

Common binding by redundant group B Sox proteins is evolutionarily conserved in Drosophila.

Carl SH, Russell S.

BMC Genomics. 2015 Apr 13;16:292. doi: 10.1186/s12864-015-1495-3.

13.

Evolution of herbivory in Drosophilidae linked to loss of behaviors, antennal responses, odorant receptors, and ancestral diet.

Goldman-Huertas B, Mitchell RF, Lapoint RT, Faucher CP, Hildebrand JG, Whiteman NK.

Proc Natl Acad Sci U S A. 2015 Mar 10;112(10):3026-31. doi: 10.1073/pnas.1424656112. Epub 2015 Jan 26.

14.

The Release 6 reference sequence of the Drosophila melanogaster genome.

Hoskins RA, Carlson JW, Wan KH, Park S, Mendez I, Galle SE, Booth BW, Pfeiffer BD, George RA, Svirskas R, Krzywinski M, Schein J, Accardo MC, Damia E, Messina G, Méndez-Lago M, de Pablos B, Demakova OV, Andreyeva EN, Boldyreva LV, Marra M, Carvalho AB, Dimitri P, Villasante A, Zhimulev IF, Rubin GM, Karpen GH, Celniker SE.

Genome Res. 2015 Mar;25(3):445-58. doi: 10.1101/gr.185579.114. Epub 2015 Jan 14.

15.

Non-coding roX RNAs prevent the binding of the MSL-complex to heterochromatic regions.

Figueiredo ML, Kim M, Philip P, Allgardsson A, Stenberg P, Larsson J.

PLoS Genet. 2014 Dec 11;10(12):e1004865. doi: 10.1371/journal.pgen.1004865. eCollection 2014 Dec.

16.

FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations.

dos Santos G, Schroeder AJ, Goodman JL, Strelets VB, Crosby MA, Thurmond J, Emmert DB, Gelbart WM; FlyBase Consortium..

Nucleic Acids Res. 2015 Jan;43(Database issue):D690-7. doi: 10.1093/nar/gku1099. Epub 2014 Nov 14.

17.

Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library.

Lowe N, Rees JS, Roote J, Ryder E, Armean IM, Johnson G, Drummond E, Spriggs H, Drummond J, Magbanua JP, Naylor H, Sanson B, Bastock R, Huelsmann S, Trovisco V, Landgraf M, Knowles-Barley S, Armstrong JD, White-Cooper H, Hansen C, Phillips RG; UK Drosophila Protein Trap Screening Consortium., Lilley KS, Russell S, St Johnston D.

Development. 2014 Oct;141(20):3994-4005. doi: 10.1242/dev.111054.

18.

Illumina TruSeq synthetic long-reads empower de novo assembly and resolve complex, highly-repetitive transposable elements.

McCoy RC, Taylor RW, Blauwkamp TA, Kelley JL, Kertesz M, Pushkarev D, Petrov DA, Fiston-Lavier AS.

PLoS One. 2014 Sep 4;9(9):e106689. doi: 10.1371/journal.pone.0106689. eCollection 2014.

19.

History of the discovery of a master locus producing piRNAs: the flamenco/COM locus in Drosophila melanogaster.

Goriaux C, Théron E, Brasset E, Vaury C.

Front Genet. 2014 Aug 4;5:257. doi: 10.3389/fgene.2014.00257. eCollection 2014. Review.

20.

Nucleosomes shape DNA polymorphism and divergence.

Langley SA, Karpen GH, Langley CH.

PLoS Genet. 2014 Jul 3;10(7):e1004457. doi: 10.1371/journal.pgen.1004457. eCollection 2014 Jul.

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