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Items: 1 to 20 of 36


Small methyltransferase RlmH assembles a composite active site to methylate a ribosomal pseudouridine.

Koh CS, Madireddy R, Beane TJ, Zamore PD, Korostelev AA.

Sci Rep. 2017 Apr 20;7(1):969. doi: 10.1038/s41598-017-01186-5.


Methylation at position 32 of tRNA catalyzed by TrmJ alters oxidative stress response in Pseudomonas aeruginosa.

Jaroensuk J, Atichartpongkul S, Chionh YH, Wong YH, Liew CW, McBee ME, Thongdee N, Prestwich EG, DeMott MS, Mongkolsuk S, Dedon PC, Lescar J, Fuangthong M.

Nucleic Acids Res. 2016 Dec 15;44(22):10834-10848. Epub 2016 Sep 28.


Methyl transfer by substrate signaling from a knotted protein fold.

Christian T, Sakaguchi R, Perlinska AP, Lahoud G, Ito T, Taylor EA, Yokoyama S, Sulkowska JI, Hou YM.

Nat Struct Mol Biol. 2016 Oct;23(10):941-948. doi: 10.1038/nsmb.3282. Epub 2016 Aug 29.


Folding analysis of the most complex Stevedore's protein knot.

Wang I, Chen SY, Hsu ST.

Sci Rep. 2016 Aug 16;6:31514. doi: 10.1038/srep31514.


Structural basis for Sfm1 functioning as a protein arginine methyltransferase.

Lv F, Zhang T, Zhou Z, Gao S, Wong CC, Zhou JQ, Ding J.

Cell Discov. 2015 Dec 29;1:15037. doi: 10.1038/celldisc.2015.37. eCollection 2015.


Lessons from making the Structural Classification of Proteins (SCOP) and their implications for protein structure modelling.

Andreeva A.

Biochem Soc Trans. 2016 Jun 15;44(3):937-43. doi: 10.1042/BST20160053. Review.


Structural basis for methyl-donor-dependent and sequence-specific binding to tRNA substrates by knotted methyltransferase TrmD.

Ito T, Masuda I, Yoshida K, Goto-Ito S, Sekine S, Suh SW, Hou YM, Yokoyama S.

Proc Natl Acad Sci U S A. 2015 Aug 4;112(31):E4197-205. doi: 10.1073/pnas.1422981112. Epub 2015 Jul 16.


Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15I.

Gupta YK, Chan SH, Xu SY, Aggarwal AK.

Nat Commun. 2015 Jun 12;6:7363. doi: 10.1038/ncomms8363.


A knot in the protein structure - probing the near-infrared fluorescent protein iRFP designed from a bacterial phytochrome.

Stepanenko OV, Bublikov GS, Stepanenko OV, Shcherbakova DM, Verkhusha VV, Turoverov KK, Kuznetsova IM.

FEBS J. 2014 May;281(9):2284-98. doi: 10.1111/febs.12781. Epub 2014 Apr 1.


Crystal structure of tRNA m1G9 methyltransferase Trm10: insight into the catalytic mechanism and recognition of tRNA substrate.

Shao Z, Yan W, Peng J, Zuo X, Zou Y, Li F, Gong D, Ma R, Wu J, Shi Y, Zhang Z, Teng M, Li X, Gong Q.

Nucleic Acids Res. 2014 Jan;42(1):509-25. doi: 10.1093/nar/gkt869. Epub 2013 Sep 29.


The catalytic domain of topological knot tRNA methyltransferase (TrmH) discriminates between substrate tRNA and nonsubstrate tRNA via an induced-fit process.

Ochi A, Makabe K, Yamagami R, Hirata A, Sakaguchi R, Hou YM, Watanabe K, Nureki O, Kuwajima K, Hori H.

J Biol Chem. 2013 Aug 30;288(35):25562-74. doi: 10.1074/jbc.M113.485128. Epub 2013 Jul 18.


Structural basis for S-adenosylmethionine binding and methyltransferase activity by mitochondrial transcription factor B1.

Guja KE, Venkataraman K, Yakubovskaya E, Shi H, Mejia E, Hambardjieva E, Karzai AW, Garcia-Diaz M.

Nucleic Acids Res. 2013 Sep;41(16):7947-59. doi: 10.1093/nar/gkt547. Epub 2013 Jun 26.


Overcoming sequence misalignments with weighted structural superposition.

Khazanov NA, Damm-Ganamet KL, Quang DX, Carlson HA.

Proteins. 2012 Nov;80(11):2523-35. doi: 10.1002/prot.24134. Epub 2012 Jul 28.


The role of non-native interactions in the folding of knotted proteins.

Skrbić T, Micheletti C, Faccioli P.

PLoS Comput Biol. 2012;8(6):e1002504. doi: 10.1371/journal.pcbi.1002504. Epub 2012 Jun 14.


Bioinformatic Identification of Novel Methyltransferases.

Petrossian T, Clarke S.

Epigenomics. 2009 Oct 1;1(1):163-175.


Crystallization and preliminary crystallographic analysis of nosiheptide-resistance methyltransferase from Streptomyces actuosus in complex with SAM.

Yang H, Wang P, Dong Z, Li X, Gong R, Yang Y, Li Z, Xu Y, Xu Y.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 May 1;66(Pt 5):579-82. doi: 10.1107/S1744309110011395. Epub 2010 Apr 30.


Structure of the thiostrepton resistance methyltransferase.S-adenosyl-L-methionine complex and its interaction with ribosomal RNA.

Dunstan MS, Hang PC, Zelinskaya NV, Honek JF, Conn GL.

J Biol Chem. 2009 Jun 19;284(25):17013-20. doi: 10.1074/jbc.M901618200. Epub 2009 Apr 15.


Exploring knotting mechanisms in protein folding.

Mallam AL, Morris ER, Jackson SE.

Proc Natl Acad Sci U S A. 2008 Dec 2;105(48):18740-5. doi: 10.1073/pnas.0806697105. Epub 2008 Nov 17.


Subcellular localization and RNA interference of an RNA methyltransferase gene from silkworm, Bombyx mori.

Nie Z, Zhou R, Chen J, Wang D, Lv Z, He P, Wang X, Shen H, Wu X, Zhang Y.

Comp Funct Genomics. 2008:571023. doi: 10.1155/2008/571023.

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