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Items: 16

1.

Establishment of quantitative severity evaluation model for spinal cord injury by metabolomic fingerprinting.

Peng J, Zeng J, Cai B, Yang H, Cohen MJ, Chen W, Sun MW, Lu CD, Jiang H.

PLoS One. 2014 Apr 11;9(4):e93736. doi: 10.1371/journal.pone.0093736.

2.

Molecular evolution of threonine dehydratase in bacteria.

Yu X, Li Y, Wang X.

PLoS One. 2013 Dec 4;8(12):e80750. doi: 10.1371/journal.pone.0080750.

3.
4.

Origins of specificity and promiscuity in metabolic networks.

Carbonell P, Lecointre G, Faulon JL.

J Biol Chem. 2011 Dec 23;286(51):43994-4004. doi: 10.1074/jbc.M111.274050.

5.

Horizontal and vertical growth of S. cerevisiae metabolic network.

Grassi L, Tramontano A.

BMC Evol Biol. 2011 Oct 14;11:301. doi: 10.1186/1471-2148-11-301.

6.

Structural correlations in bacterial metabolic networks.

Bernhardsson S, Gerlee P, Lizana L.

BMC Evol Biol. 2011 Jan 20;11:20. doi: 10.1186/1471-2148-11-20.

7.

microRNA evolution in a human transcription factor and microRNA regulatory network.

Qiu C, Wang J, Yao P, Wang E, Cui Q.

BMC Syst Biol. 2010 Jun 29;4:90. doi: 10.1186/1752-0509-4-90.

8.

Evolutionarily conserved substrate substructures for automated annotation of enzyme superfamilies.

Chiang RA, Sali A, Babbitt PC.

PLoS Comput Biol. 2008 Aug 1;4(8):e1000142. doi: 10.1371/journal.pcbi.1000142.

9.

The hidden universal distribution of amino acid biosynthetic networks: a genomic perspective on their origins and evolution.

Hernández-Montes G, Díaz-Mejía JJ, Pérez-Rueda E, Segovia L.

Genome Biol. 2008;9(6):R95. doi: 10.1186/gb-2008-9-6-r95.

10.

A network perspective on the evolution of metabolism by gene duplication.

Díaz-Mejía JJ, Pérez-Rueda E, Segovia L.

Genome Biol. 2007;8(2):R26.

11.

Comparison of protein interaction networks reveals species conservation and divergence.

Liang Z, Xu M, Teng M, Niu L.

BMC Bioinformatics. 2006 Oct 17;7:457.

12.

MANET: tracing evolution of protein architecture in metabolic networks.

Kim HS, Mittenthal JE, Caetano-Anollés G.

BMC Bioinformatics. 2006 Jul 19;7:351.

13.

Preferential attachment in the evolution of metabolic networks.

Light S, Kraulis P, Elofsson A.

BMC Genomics. 2005 Nov 10;6:159.

14.

MetaRouter: bioinformatics for bioremediation.

Pazos F, Guijas D, Valencia A, De Lorenzo V.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D588-92.

15.

Network analysis of metabolic enzyme evolution in Escherichia coli.

Light S, Kraulis P.

BMC Bioinformatics. 2004 Feb 18;5:15.

16.
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