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Loss of αB-crystallin function in zebrafish reveals critical roles in the development of the lens and stress resistance of the heart.

Mishra S, Wu SY, Fuller AW, Wang Z, Rose KL, Schey KL, Mchaourab HS.

J Biol Chem. 2018 Jan 12;293(2):740-753. doi: 10.1074/jbc.M117.808634. Epub 2017 Nov 21.


Fitting structure to function in gene regulatory networks.

Rothenberg EV.

Hist Philos Life Sci. 2017 Oct 16;39(4):37. doi: 10.1007/s40656-017-0164-z.


A bipolar role of the transcription factor ERG for cnidarian germ layer formation and apical domain patterning.

Amiel AR, Johnston H, Chock T, Dahlin P, Iglesias M, Layden M, Röttinger E, Martindale MQ.

Dev Biol. 2017 Oct 15;430(2):346-361. doi: 10.1016/j.ydbio.2017.08.015. Epub 2017 Aug 14.


Estimating optimal sparseness of developmental gene networks using a semi-quantitative model.

Ichinose N, Yada T, Wada H.

PLoS One. 2017 Apr 21;12(4):e0176492. doi: 10.1371/journal.pone.0176492. eCollection 2017.


An Elk transcription factor is required for Runx-dependent survival signaling in the sea urchin embryo.

Rizzo F, Coffman JA, Arnone MI.

Dev Biol. 2016 Aug 1;416(1):173-186. doi: 10.1016/j.ydbio.2016.05.026. Epub 2016 May 24.


A Maternal System Initiating the Zygotic Developmental Program through Combinatorial Repression in the Ascidian Embryo.

Oda-Ishii I, Kubo A, Kari W, Suzuki N, Rothbächer U, Satou Y.

PLoS Genet. 2016 May 6;12(5):e1006045. doi: 10.1371/journal.pgen.1006045. eCollection 2016 May. Erratum in: PLoS Genet. 2016 Oct 14;12 (10 ):e1006392.


The rise of the starlet sea anemone Nematostella vectensis as a model system to investigate development and regeneration.

Layden MJ, Rentzsch F, Röttinger E.

Wiley Interdiscip Rev Dev Biol. 2016 Jul;5(4):408-28. doi: 10.1002/wdev.222. Epub 2016 Feb 19. Review.


Eric Davidson: Steps to a gene regulatory network for development.

Rothenberg EV.

Dev Biol. 2016 Apr 15;412(2 Suppl):S7-19. doi: 10.1016/j.ydbio.2016.01.020. Epub 2016 Jan 26.


Reorganization of sea urchin gene regulatory networks at least 268 million years ago as revealed by oldest fossil cidaroid echinoid.

Thompson JR, Petsios E, Davidson EH, Erkenbrack EM, Gao F, Bottjer DJ.

Sci Rep. 2015 Oct 21;5:15541. doi: 10.1038/srep15541.


Feed-forward transcriptional programming by nuclear receptors: regulatory principles and therapeutic implications.

Sasse SK, Gerber AN.

Pharmacol Ther. 2015 Jan;145:85-91. doi: 10.1016/j.pharmthera.2014.08.004. Epub 2014 Aug 25. Review.


The "domestication syndrome" in mammals: a unified explanation based on neural crest cell behavior and genetics.

Wilkins AS, Wrangham RW, Fitch WT.

Genetics. 2014 Jul;197(3):795-808. doi: 10.1534/genetics.114.165423. Epub 2014 Jul 14. Erratum in: Genetics. 2014 Dec;198(4):1771.


Ca²⁺ influx-linked protein kinase C activity regulates the β-catenin localization, micromere induction signalling and the oral-aboral axis formation in early sea urchin embryos.

Yazaki I, Tsurugaya T, Santella L, Chun JT, Amore G, Kusunoki S, Asada A, Togo T, Akasaka K.

Zygote. 2015 Jun;23(3):426-46. doi: 10.1017/S0967199414000033. Epub 2014 Apr 9.


Dissection of a Ciona regulatory element reveals complexity of cross-species enhancer activity.

Chen WC, Pauls S, Bacha J, Elgar G, Loose M, Shimeld SM.

Dev Biol. 2014 Jun 15;390(2):261-72. doi: 10.1016/j.ydbio.2014.03.013. Epub 2014 Mar 28.


Expression of skeletogenic genes during arm regeneration in the brittle star Amphiura filiformis.

Czarkwiani A, Dylus DV, Oliveri P.

Gene Expr Patterns. 2013 Dec;13(8):464-72. doi: 10.1016/j.gep.2013.09.002. Epub 2013 Sep 16.


Prdm1a directly activates foxd3 and tfap2a during zebrafish neural crest specification.

Powell DR, Hernandez-Lagunas L, LaMonica K, Artinger KB.

Development. 2013 Aug;140(16):3445-55. doi: 10.1242/dev.096164.


Morphogenesis in sea urchin embryos: linking cellular events to gene regulatory network states.

Lyons DC, Kaltenbach SL, McClay DR.

Wiley Interdiscip Rev Dev Biol. 2012 Mar-Apr;1(2):231-52. doi: 10.1002/wdev.18. Epub 2011 Dec 27. Review.


A theory of biological relativity: no privileged level of causation.

Noble D.

Interface Focus. 2012 Feb 6;2(1):55-64. doi: 10.1098/rsfs.2011.0067. Epub 2011 Nov 9.


A framework for the establishment of a cnidarian gene regulatory network for "endomesoderm" specification: the inputs of ß-catenin/TCF signaling.

Röttinger E, Dahlin P, Martindale MQ.

PLoS Genet. 2012;8(12):e1003164. doi: 10.1371/journal.pgen.1003164. Epub 2012 Dec 27.


Experimental approaches for gene regulatory network construction: the chick as a model system.

Streit A, Tambalo M, Chen J, Grocott T, Anwar M, Sosinsky A, Stern CD.

Genesis. 2013 May;51(5):296-310. doi: 10.1002/dvg.22359. Epub 2012 Dec 19. Review.

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