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Items: 1 to 20 of 36

1.

Albino Leaf 2 is involved in the splicing of chloroplast group I and II introns in rice.

Liu C, Zhu H, Xing Y, Tan J, Chen X, Zhang J, Peng H, Xie Q, Zhang Z.

J Exp Bot. 2016 Oct;67(18):5339-5347. Epub 2016 Aug 19.

2.

ChloroSeq, an Optimized Chloroplast RNA-Seq Bioinformatic Pipeline, Reveals Remodeling of the Organellar Transcriptome Under Heat Stress.

Castandet B, Hotto AM, Strickler SR, Stern DB.

G3 (Bethesda). 2016 Sep 8;6(9):2817-27. doi: 10.1534/g3.116.030783.

3.

A nuclear-encoded chloroplast protein harboring a single CRM domain plays an important role in the Arabidopsis growth and stress response.

Lee K, Lee HJ, Kim DH, Jeon Y, Pai HS, Kang H.

BMC Plant Biol. 2014 Apr 16;14:98. doi: 10.1186/1471-2229-14-98.

4.

An mTERF domain protein functions in group II intron splicing in maize chloroplasts.

Hammani K, Barkan A.

Nucleic Acids Res. 2014 Apr;42(8):5033-42. doi: 10.1093/nar/gku112. Epub 2014 Feb 5.

5.

Multiple checkpoints for the expression of the chloroplast-encoded splicing factor MatK.

Hertel S, Zoschke R, Neumann L, Qu Y, Axmann IM, Schmitz-Linneweber C.

Plant Physiol. 2013 Dec;163(4):1686-98. doi: 10.1104/pp.113.227579. Epub 2013 Oct 30.

6.

Chloroplast RH3 DEAD box RNA helicases in maize and Arabidopsis function in splicing of specific group II introns and affect chloroplast ribosome biogenesis.

Asakura Y, Galarneau E, Watkins KP, Barkan A, van Wijk KJ.

Plant Physiol. 2012 Jul;159(3):961-74. doi: 10.1104/pp.112.197525. Epub 2012 May 10.

7.

A short PPR protein required for the splicing of specific group II introns in angiosperm chloroplasts.

Khrouchtchova A, Monde RA, Barkan A.

RNA. 2012 Jun;18(6):1197-209. doi: 10.1261/rna.032623.112. Epub 2012 Apr 10.

8.

Nucleoid-enriched proteomes in developing plastids and chloroplasts from maize leaves: a new conceptual framework for nucleoid functions.

Majeran W, Friso G, Asakura Y, Qu X, Huang M, Ponnala L, Watkins KP, Barkan A, van Wijk KJ.

Plant Physiol. 2012 Jan;158(1):156-89. doi: 10.1104/pp.111.188474. Epub 2011 Nov 7.

9.

Recruitment of a ribosomal release factor for light- and stress-dependent regulation of petB transcript stability in Arabidopsis chloroplasts.

Stoppel R, Lezhneva L, Schwenkert S, Torabi S, Felder S, Meierhoff K, Westhoff P, Meurer J.

Plant Cell. 2011 Jul;23(7):2680-95. doi: 10.1105/tpc.111.085324. Epub 2011 Jul 19.

10.

APO1 promotes the splicing of chloroplast group II introns and harbors a plant-specific zinc-dependent RNA binding domain.

Watkins KP, Rojas M, Friso G, van Wijk KJ, Meurer J, Barkan A.

Plant Cell. 2011 Mar;23(3):1082-92. doi: 10.1105/tpc.111.084335. Epub 2011 Mar 18.

11.

Group II introns: mobile ribozymes that invade DNA.

Lambowitz AM, Zimmerly S.

Cold Spring Harb Perspect Biol. 2011 Aug 1;3(8):a003616. doi: 10.1101/cshperspect.a003616. Review.

12.

Megadalton complexes in the chloroplast stroma of Arabidopsis thaliana characterized by size exclusion chromatography, mass spectrometry, and hierarchical clustering.

Olinares PD, Ponnala L, van Wijk KJ.

Mol Cell Proteomics. 2010 Jul;9(7):1594-615. doi: 10.1074/mcp.M000038-MCP201. Epub 2010 Apr 26.

13.

Post-transcriptional control of chloroplast gene expression.

del Campo EM.

Gene Regul Syst Bio. 2009 Mar 12;3:31-47.

14.

A phosphofructokinase B-type carbohydrate kinase family protein, NARA5, for massive expressions of plastid-encoded photosynthetic genes in Arabidopsis.

Ogawa T, Nishimura K, Aoki T, Takase H, Tomizawa K, Ashida H, Yokota A.

Plant Physiol. 2009 Sep;151(1):114-28. doi: 10.1104/pp.109.139683. Epub 2009 Jul 8.

15.

A frameshift mutation of the chloroplast matK coding region is associated with chlorophyll deficiency in the Cryptomeria japonica virescent mutant Wogon-Sugi.

Hirao T, Watanabe A, Kurita M, Kondo T, Takata K.

Curr Genet. 2009 Jun;55(3):311-21. doi: 10.1007/s00294-009-0247-9. Epub 2009 May 18.

16.

Site-specific binding of a PPR protein defines and stabilizes 5' and 3' mRNA termini in chloroplasts.

Pfalz J, Bayraktar OA, Prikryl J, Barkan A.

EMBO J. 2009 Jul 22;28(14):2042-52. doi: 10.1038/emboj.2009.121. Epub 2009 May 7.

17.

A plant-specific RNA-binding domain revealed through analysis of chloroplast group II intron splicing.

Kroeger TS, Watkins KP, Friso G, van Wijk KJ, Barkan A.

Proc Natl Acad Sci U S A. 2009 Mar 17;106(11):4537-42. doi: 10.1073/pnas.0812503106. Epub 2009 Feb 26.

18.

Two CRM protein subfamilies cooperate in the splicing of group IIB introns in chloroplasts.

Asakura Y, Bayraktar OA, Barkan A.

RNA. 2008 Nov;14(11):2319-32. doi: 10.1261/rna.1223708. Epub 2008 Sep 17.

19.

A member of the Whirly family is a multifunctional RNA- and DNA-binding protein that is essential for chloroplast biogenesis.

Prikryl J, Watkins KP, Friso G, van Wijk KJ, Barkan A.

Nucleic Acids Res. 2008 Sep;36(16):5152-65. doi: 10.1093/nar/gkn492. Epub 2008 Aug 2.

20.

The pentatricopeptide repeat protein PPR5 stabilizes a specific tRNA precursor in maize chloroplasts.

Beick S, Schmitz-Linneweber C, Williams-Carrier R, Jensen B, Barkan A.

Mol Cell Biol. 2008 Sep;28(17):5337-47. doi: 10.1128/MCB.00563-08. Epub 2008 Jun 30.

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