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Items: 1 to 20 of 38

1.

Interactions of Freshwater Cyanobacteria with Bacterial Antagonists.

Osman OA, Beier S, Grabherr M, Bertilsson S.

Appl Environ Microbiol. 2017 Mar 17;83(7). pii: e02634-16. doi: 10.1128/AEM.02634-16. Print 2017 Apr 1.

2.

Horizontal Gene Transfer Contributes to the Evolution of Arthropod Herbivory.

Wybouw N, Pauchet Y, Heckel DG, Van Leeuwen T.

Genome Biol Evol. 2016 Jun 27;8(6):1785-801. doi: 10.1093/gbe/evw119.

3.

Transcriptome Sequencing Reveals Wide Expression Reprogramming of Basal and Unknown Genes in Leptospira biflexa Biofilms.

Iraola G, Spangenberg L, Lopes Bastos B, Graña M, Vasconcelos L, Almeida Á, Greif G, Robello C, Ristow P, Naya H.

mSphere. 2016 Apr 6;1(2). pii: e00042-16. doi: 10.1128/mSphere.00042-16. eCollection 2016 Mar-Apr.

4.

Gene Expression Analysis of Four Radiation-resistant Bacteria.

Gao N, Ma BG, Zhang YS, Song Q, Chen LL, Zhang HY.

Genomics Insights. 2009 Jun 16;2:11-22. eCollection 2009.

5.

Unraveling vitamin B12-responsive gene regulation in algae.

Helliwell KE, Scaife MA, Sasso S, Araujo AP, Purton S, Smith AG.

Plant Physiol. 2014 May;165(1):388-97. doi: 10.1104/pp.113.234369. Epub 2014 Mar 13.

6.

Identification of the nature of reading frame transitions observed in prokaryotic genomes.

Antonov I, Coakley A, Atkins JF, Baranov PV, Borodovsky M.

Nucleic Acids Res. 2013 Jul;41(13):6514-30. doi: 10.1093/nar/gkt274. Epub 2013 May 6.

7.

The biology of habitat dominance; can microbes behave as weeds?

Cray JA, Bell AN, Bhaganna P, Mswaka AY, Timson DJ, Hallsworth JE.

Microb Biotechnol. 2013 Sep;6(5):453-92. doi: 10.1111/1751-7915.12027. Epub 2013 Jan 22. Review.

8.

On ribosome load, codon bias and protein abundance.

Klumpp S, Dong J, Hwa T.

PLoS One. 2012;7(11):e48542. doi: 10.1371/journal.pone.0048542. Epub 2012 Nov 7.

9.

Genomics of the proteorhodopsin-containing marine flavobacterium Dokdonia sp. strain MED134.

González JM, Pinhassi J, Fernández-Gómez B, Coll-Lladó M, González-Velázquez M, Puigbò P, Jaenicke S, Gómez-Consarnau L, Fernàndez-Guerra A, Goesmann A, Pedrós-Alió C.

Appl Environ Microbiol. 2011 Dec;77(24):8676-86. doi: 10.1128/AEM.06152-11. Epub 2011 Oct 14.

10.

Relative codon adaptation: a generic codon bias index for prediction of gene expression.

Fox JM, Erill I.

DNA Res. 2010 Jun;17(3):185-96. doi: 10.1093/dnares/dsq012. Epub 2010 May 7.

11.

The yfiC gene of E. coli encodes an adenine-N6 methyltransferase that specifically modifies A37 of tRNA1Val(cmo5UAC).

Golovina AY, Sergiev PV, Golovin AV, Serebryakova MV, Demina I, Govorun VM, Dontsova OA.

RNA. 2009 Jun;15(6):1134-41. doi: 10.1261/rna.1494409. Epub 2009 Apr 21.

12.

Combined protein construct and synthetic gene engineering for heterologous protein expression and crystallization using Gene Composer.

Raymond A, Lovell S, Lorimer D, Walchli J, Mixon M, Wallace E, Thompkins K, Archer K, Burgin A, Stewart L.

BMC Biotechnol. 2009 Apr 21;9:37. doi: 10.1186/1472-6750-9-37.

13.

Unusual codon usage bias in low expression genes of Vibrio cholerae.

Basak S, Mukherjee I, Choudhury M, Das S.

Bioinformation. 2008;3(5):213-7. Epub 2008 Dec 31.

14.

Predicting gene expression level from relative codon usage bias: an application to Escherichia coli genome.

Roymondal U, Das S, Sahoo S.

DNA Res. 2009 Feb;16(1):13-30. doi: 10.1093/dnares/dsn029. Epub 2009 Jan 8.

15.

Comparison of correspondence analysis methods for synonymous codon usage in bacteria.

Suzuki H, Brown CJ, Forney LJ, Top EM.

DNA Res. 2008 Dec;15(6):357-65. doi: 10.1093/dnares/dsn028. Epub 2008 Oct 21.

16.

Proteomic analysis of Vibrio cholerae in human stool.

LaRocque RC, Krastins B, Harris JB, Lebrun LM, Parker KC, Chase M, Ryan ET, Qadri F, Sarracino D, Calderwood SB.

Infect Immun. 2008 Sep;76(9):4145-51. doi: 10.1128/IAI.00585-08. Epub 2008 Jun 30.

17.

Protein abundance profiling of the Escherichia coli cytosol.

Ishihama Y, Schmidt T, Rappsilber J, Mann M, Hartl FU, Kerner MJ, Frishman D.

BMC Genomics. 2008 Feb 27;9:102. doi: 10.1186/1471-2164-9-102.

18.

Quorum sensing influences Vibrio harveyi growth rates in a manner not fully accounted for by the marker effect of bioluminescence.

Nackerdien ZE, Keynan A, Bassler BL, Lederberg J, Thaler DS.

PLoS One. 2008 Feb 27;3(2):e1671. doi: 10.1371/journal.pone.0001671.

19.

HEG-DB: a database of predicted highly expressed genes in prokaryotic complete genomes under translational selection.

Puigbò P, Romeu A, Garcia-Vallvé S.

Nucleic Acids Res. 2008 Jan;36(Database issue):D524-7. Epub 2007 Oct 11.

20.

Distinguishing features of delta-proteobacterial genomes.

Karlin S, Brocchieri L, Mrázek J, Kaiser D.

Proc Natl Acad Sci U S A. 2006 Jul 25;103(30):11352-7. Epub 2006 Jul 14.

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