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Items: 1 to 20 of 61

1.

Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle.

Aranda M, Li Y, Liew YJ, Baumgarten S, Simakov O, Wilson MC, Piel J, Ashoor H, Bougouffa S, Bajic VB, Ryu T, Ravasi T, Bayer T, Micklem G, Kim H, Bhak J, LaJeunesse TC, Voolstra CR.

Sci Rep. 2016 Dec 22;6:39734. doi: 10.1038/srep39734.

2.

A Network of Conserved Synthetic Lethal Interactions for Exploration of Precision Cancer Therapy.

Srivas R, Shen JP, Yang CC, Sun SM, Li J, Gross AM, Jensen J, Licon K, Bojorquez-Gomez A, Klepper K, Huang J, Pekin D, Xu JL, Yeerna H, Sivaganesh V, Kollenstart L, van Attikum H, Aza-Blanc P, Sobol RW, Ideker T.

Mol Cell. 2016 Aug 4;63(3):514-25. doi: 10.1016/j.molcel.2016.06.022.

PMID:
27453043
3.

Long Terminal Repeats: From Parasitic Elements to Building Blocks of the Transcriptional Regulatory Repertoire.

Thompson PJ, Macfarlan TS, Lorincz MC.

Mol Cell. 2016 Jun 2;62(5):766-76. doi: 10.1016/j.molcel.2016.03.029. Review.

PMID:
27259207
4.

Changes in snoRNA and snRNA Abundance in the Human, Chimpanzee, Macaque, and Mouse Brain.

Zhang B, Han D, Korostelev Y, Yan Z, Shao N, Khrameeva E, Velichkovsky BM, Chen YP, Gelfand MS, Khaitovich P.

Genome Biol Evol. 2016 Mar 23;8(3):840-50. doi: 10.1093/gbe/evw038.

5.

Take the monkey and run.

Phillips KA, Hambright MK, Hewes K, Schilder BM, Ross CN, Tardif SD.

J Neurosci Methods. 2015 Jun 15;248:27-31. doi: 10.1016/j.jneumeth.2015.03.023.

6.

A Protocol for Diagnosing the Effect of Calibration Priors on Posterior Time Estimates: A Case Study for the Cambrian Explosion of Animal Phyla.

Battistuzzi FU, Billing-Ross P, Murillo O, Filipski A, Kumar S.

Mol Biol Evol. 2015 Jul;32(7):1907-12. doi: 10.1093/molbev/msv075.

7.

Eosinophil-associated ribonuclease 11 is a macrophage chemoattractant.

Yamada KJ, Barker T, Dyer KD, Rice TA, Percopo CM, Garcia-Crespo KE, Cho S, Lee JJ, Druey KM, Rosenberg HF.

J Biol Chem. 2015 Apr 3;290(14):8863-75. doi: 10.1074/jbc.M114.626648.

8.

A transient receptor potential ion channel in Chlamydomonas shares key features with sensory transduction-associated TRP channels in mammals.

Arias-Darraz L, Cabezas D, Colenso CK, Alegría-Arcos M, Bravo-Moraga F, Varas-Concha I, Almonacid DE, Madrid R, Brauchi S.

Plant Cell. 2015 Jan;27(1):177-88. doi: 10.1105/tpc.114.131862.

9.

XRCC5 as a risk gene for alcohol dependence: evidence from a genome-wide gene-set-based analysis and follow-up studies in Drosophila and humans.

Juraeva D, Treutlein J, Scholz H, Frank J, Degenhardt F, Cichon S, Ridinger M, Mattheisen M, Witt SH, Lang M, Sommer WH, Hoffmann P, Herms S, Wodarz N, Soyka M, Zill P, Maier W, Jünger E, Gaebel W, Dahmen N, Scherbaum N, Schmäl C, Steffens M, Lucae S, Ising M, Smolka MN, Zimmermann US, Müller-Myhsok B, Nöthen MM, Mann K, Kiefer F, Spanagel R, Brors B, Rietschel M.

Neuropsychopharmacology. 2015 Jan;40(2):361-71. doi: 10.1038/npp.2014.178.

10.

Evolution of H3K27me3-marked chromatin is linked to gene expression evolution and to patterns of gene duplication and diversification.

Arthur RK, Ma L, Slattery M, Spokony RF, Ostapenko A, Nègre N, White KP.

Genome Res. 2014 Jul;24(7):1115-24. doi: 10.1101/gr.162008.113.

11.

Androgen-dependent sertoli cell tight junction remodeling is mediated by multiple tight junction components.

Chakraborty P, William Buaas F, Sharma M, Smith BE, Greenlee AR, Eacker SM, Braun RE.

Mol Endocrinol. 2014 Jul;28(7):1055-72. doi: 10.1210/me.2013-1134.

12.

Integrating microRNA and mRNA expression profiling in Symbiodinium microadriaticum, a dinoflagellate symbiont of reef-building corals.

Baumgarten S, Bayer T, Aranda M, Liew YJ, Carr A, Micklem G, Voolstra CR.

BMC Genomics. 2013 Oct 12;14:704. doi: 10.1186/1471-2164-14-704.

13.

Modeling Huntington's disease with induced pluripotent stem cells.

Kaye JA, Finkbeiner S.

Mol Cell Neurosci. 2013 Sep;56:50-64. doi: 10.1016/j.mcn.2013.02.005. Review.

14.

Rattusin, an intestinal α-defensin-related peptide in rats with a unique cysteine spacing pattern and salt-insensitive antibacterial activities.

Patil AA, Ouellette AJ, Lu W, Zhang G.

Antimicrob Agents Chemother. 2013 Apr;57(4):1823-31. doi: 10.1128/AAC.02237-12.

15.

Exploring metazoan evolution through dynamic and holistic changes in protein families and domains.

Wang Z, Zarlenga D, Martin J, Abubucker S, Mitreva M.

BMC Evol Biol. 2012 Aug 3;12:138. doi: 10.1186/1471-2148-12-138.

16.

Transcriptional regulation: a genomic overview.

Riechmann JL.

Arabidopsis Book. 2002;1:e0085. doi: 10.1199/tab.0085.

17.

Origination of new immunological functions in the costimulatory molecule B7-H3: the role of exon duplication in evolution of the immune system.

Sun J, Fu F, Gu W, Yan R, Zhang G, Shen Z, Zhou Y, Wang H, Shen B, Zhang X.

PLoS One. 2011;6(9):e24751. doi: 10.1371/journal.pone.0024751.

18.

Cloud computing for comparative genomics.

Wall DP, Kudtarkar P, Fusaro VA, Pivovarov R, Patil P, Tonellato PJ.

BMC Bioinformatics. 2010 May 18;11:259. doi: 10.1186/1471-2105-11-259.

19.

Performance of relaxed-clock methods in estimating evolutionary divergence times and their credibility intervals.

Battistuzzi FU, Filipski A, Hedges SB, Kumar S.

Mol Biol Evol. 2010 Jun;27(6):1289-300. doi: 10.1093/molbev/msq014.

20.

Databases of homologous gene families for comparative genomics.

Penel S, Arigon AM, Dufayard JF, Sertier AS, Daubin V, Duret L, Gouy M, Perrière G.

BMC Bioinformatics. 2009 Jun 16;10 Suppl 6:S3. doi: 10.1186/1471-2105-10-S6-S3.

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