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Items: 1 to 20 of 91


Comparing the genomes of cutaneous melanoma tumors to commercially available cell lines.

Luebker SA, Zhang W, Koepsell SA.

Oncotarget. 2017 Dec 4;8(70):114877-114893. doi: 10.18632/oncotarget.22928. eCollection 2017 Dec 29.


LSD1 protects against hippocampal and cortical neurodegeneration.

Christopher MA, Myrick DA, Barwick BG, Engstrom AK, Porter-Stransky KA, Boss JM, Weinshenker D, Levey AI, Katz DJ.

Nat Commun. 2017 Oct 9;8(1):805. doi: 10.1038/s41467-017-00922-9.


ExAtlas: An interactive online tool for meta-analysis of gene expression data.

Sharov AA, Schlessinger D, Ko MS.

J Bioinform Comput Biol. 2015 Dec;13(6):1550019. doi: 10.1142/S0219720015500195. Epub 2015 Jun 9.


ISOB: A Database of Indigenous Snake Species of Bangladesh with respective known venom composition.

Roly ZY, Hakim MA, Zahan AS, Hossain MM, Reza MA.

Bioinformation. 2015 Feb 28;11(2):107-14. doi: 10.6026/97320630011107. eCollection 2015.


A gene mapping bottleneck in the translational route from zebrafish to human.

de Klein N, Ibberson M, Crespo I, Rodius S, Azuaje F.

Front Genet. 2015 Jan 12;5:470. doi: 10.3389/fgene.2014.00470. eCollection 2014.


A systems biology approach reveals a link between systemic cytokines and skeletal muscle energy metabolism in a rodent smoking model and human COPD.

Davidsen PK, Herbert JM, Antczak P, Clarke K, Ferrer E, Peinado VI, Gonzalez C, Roca J, Egginton S, Barberá JA, Falciani F.

Genome Med. 2014 Aug 9;6(8):59. doi: 10.1186/s13073-014-0059-5. eCollection 2014.


Functionally enigmatic genes: a case study of the brain ignorome.

Pandey AK, Lu L, Wang X, Homayouni R, Williams RW.

PLoS One. 2014 Feb 11;9(2):e88889. doi: 10.1371/journal.pone.0088889. eCollection 2014.


GobyWeb: simplified management and analysis of gene expression and DNA methylation sequencing data.

Dorff KC, Chambwe N, Zeno Z, Simi M, Shaknovich R, Campagne F.

PLoS One. 2013 Jul 23;8(7):e69666. doi: 10.1371/journal.pone.0069666. Print 2013.


A sequence-based variation map of zebrafish.

Patowary A, Purkanti R, Singh M, Chauhan R, Singh AR, Swarnkar M, Singh N, Pandey V, Torroja C, Clark MD, Kocher JP, Clark KJ, Stemple DL, Klee EW, Ekker SC, Scaria V, Sivasubbu S.

Zebrafish. 2013 Mar;10(1):15-20. doi: 10.1089/zeb.2012.0848.


Immunoglobulin light chains in medaka (Oryzias latipes).

Magadán-Mompó S, Zimmerman AM, Sánchez-Espinel C, Gambón-Deza F.

Immunogenetics. 2013 May;65(5):387-96. doi: 10.1007/s00251-013-0678-9. Epub 2013 Feb 17.


One size does not fit all: on how Markov model order dictates performance of genomic sequence analyses.

Narlikar L, Mehta N, Galande S, Arjunwadkar M.

Nucleic Acids Res. 2013 Feb 1;41(3):1416-24. doi: 10.1093/nar/gks1285. Epub 2012 Dec 24.


Comparative analyses of transport proteins encoded within the genomes of Mycobacterium tuberculosis and Mycobacterium leprae.

Youm J, Saier MH Jr.

Biochim Biophys Acta. 2012 Mar;1818(3):776-97. doi: 10.1016/j.bbamem.2011.11.015. Epub 2011 Nov 29.


An integrative approach to ortholog prediction for disease-focused and other functional studies.

Hu Y, Flockhart I, Vinayagam A, Bergwitz C, Berger B, Perrimon N, Mohr SE.

BMC Bioinformatics. 2011 Aug 31;12:357. doi: 10.1186/1471-2105-12-357.


Myelin basic protein as a novel genetic risk factor in rheumatoid arthritis--a genome-wide study combined with immunological analyses.

Terao C, Ohmura K, Katayama M, Takahashi M, Kokubo M, Diop G, Toda Y, Yamamoto N; Human Disease Genomics Working Group; Rheumatoid Arthritis (RA) Clinical and Genetic Study Consortium, Shinkura R, Shimizu M, Gut I, Heath S, Melchers I, Manabe T, Lathrop M, Mimori T, Yamada R, Matsuda F.

PLoS One. 2011;6(6):e20457. doi: 10.1371/journal.pone.0020457. Epub 2011 Jun 3.


Major prospects for exploring canine vector borne diseases and novel intervention methods using 'omic technologies.

Gasser RB, Cantacessi C, Campbell BE, Hofmann A, Otranto D.

Parasit Vectors. 2011 Apr 13;4:53. doi: 10.1186/1756-3305-4-53. Review.


Engineering BAC reporter gene constructs for mouse transgenesis.

Fu Y, Maye P.

Methods Mol Biol. 2011;693:163-79. doi: 10.1007/978-1-60761-974-1_10.


Detecting variants with Metabolic Design, a new software tool to design probes for explorative functional DNA microarray development.

Terrat S, Peyretaillade E, Gonçalves O, Dugat-Bony E, Gravelat F, Moné A, Biderre-Petit C, Boucher D, Troquet J, Peyret P.

BMC Bioinformatics. 2010 Sep 23;11:478. doi: 10.1186/1471-2105-11-478.


Quantitative gene expression profiles in real time from expressed sequence tag databases.

Funari VA, Voevodski K, Leyfer D, Yerkes L, Cramer D, Tolan DR.

Gene Expr. 2010;14(6):321-36.


HangOut: generating clean PSI-BLAST profiles for domains with long insertions.

Kim BH, Cong Q, Grishin NV.

Bioinformatics. 2010 Jun 15;26(12):1564-5. doi: 10.1093/bioinformatics/btq208. Epub 2010 Apr 22.

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