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Exon Junction Complexes Show a Distributional Bias toward Alternatively Spliced mRNAs and against mRNAs Coding for Ribosomal Proteins.

Hauer C, Sieber J, Schwarzl T, Hollerer I, Curk T, Alleaume AM, Hentze MW, Kulozik AE.

Cell Rep. 2016 Aug 9;16(6):1588-603. doi: 10.1016/j.celrep.2016.06.096. Epub 2016 Jul 28.


The RNA-binding profile of Acinus, a peripheral component of the exon junction complex, reveals its role in splicing regulation.

Rodor J, Pan Q, Blencowe BJ, Eyras E, Cáceres JF.

RNA. 2016 Sep;22(9):1411-26. doi: 10.1261/rna.057158.116. Epub 2016 Jun 30.


Identification and characterization of MAGO and Y14 genes in Hevea brasiliensis.

Yang ZP, Li HL, Guo D, Peng SQ.

Genet Mol Biol. 2016 Mar;39(1):73-85. doi: 10.1590/1678-4685-GMB-2014-0387.


Long noncoding RNA H19 indicates a poor prognosis of colorectal cancer and promotes tumor growth by recruiting and binding to eIF4A3.

Han D, Gao X, Wang M, Qiao Y, Xu Y, Yang J, Dong N, He J, Sun Q, Lv G, Xu C, Tao J, Ma N.

Oncotarget. 2016 Apr 19;7(16):22159-73. doi: 10.18632/oncotarget.8063.


SR proteins are NXF1 adaptors that link alternative RNA processing to mRNA export.

Müller-McNicoll M, Botti V, de Jesus Domingues AM, Brandl H, Schwich OD, Steiner MC, Curk T, Poser I, Zarnack K, Neugebauer KM.

Genes Dev. 2016 Mar 1;30(5):553-66. doi: 10.1101/gad.276477.115.


Splicing of Friend Murine Leukemia Virus env-mRNA Enhances Its Ability to Form Polysomes.

Machinaga A, Ishihara S, Shirai A, Takase-Yoden S.

Front Microbiol. 2016 Feb 16;7:160. doi: 10.3389/fmicb.2016.00160. eCollection 2016.


Recent transcriptome-wide mapping of UPF1 binding sites reveals evidence for its recruitment to mRNA before translation.

Zünd D, Mühlemann O.

Translation (Austin). 2013 Oct 31;1(2):e26977. doi: 10.4161/trla.26977. eCollection 2013.


Nonsense-mediated mRNA decay in humans at a glance.

Kurosaki T, Maquat LE.

J Cell Sci. 2016 Feb 1;129(3):461-7. doi: 10.1242/jcs.181008. Epub 2016 Jan 19.


A short conserved motif in ALYREF directs cap- and EJC-dependent assembly of export complexes on spliced mRNAs.

Gromadzka AM, Steckelberg AL, Singh KK, Hofmann K, Gehring NH.

Nucleic Acids Res. 2016 Mar 18;44(5):2348-61. doi: 10.1093/nar/gkw009. Epub 2016 Jan 14.


Transcriptome-Wide Identification of RNA Targets of Arabidopsis SERINE/ARGININE-RICH45 Uncovers the Unexpected Roles of This RNA Binding Protein in RNA Processing.

Xing D, Wang Y, Hamilton M, Ben-Hur A, Reddy AS.

Plant Cell. 2015 Dec;27(12):3294-308. doi: 10.1105/tpc.15.00641. Epub 2015 Nov 24.


Nonsense-Mediated mRNA Decay: Degradation of Defective Transcripts Is Only Part of the Story.

He F, Jacobson A.

Annu Rev Genet. 2015;49:339-66. doi: 10.1146/annurev-genet-112414-054639. Epub 2015 Oct 2. Review.


Splicing Machinery Facilitates Post-Transcriptional Regulation by FBFs and Other RNA-Binding Proteins in Caenorhabditis elegans Germline.

Novak P, Wang X, Ellenbecker M, Feilzer S, Voronina E.

G3 (Bethesda). 2015 Aug 11;5(10):2051-9. doi: 10.1534/g3.115.019315.


Improved binding site assignment by high-resolution mapping of RNA-protein interactions using iCLIP.

Hauer C, Curk T, Anders S, Schwarzl T, Alleaume AM, Sieber J, Hollerer I, Bhuvanagiri M, Huber W, Hentze MW, Kulozik AE.

Nat Commun. 2015 Aug 11;6:7921. doi: 10.1038/ncomms8921.


A Novel Locus Harbouring a Functional CD164 Nonsense Mutation Identified in a Large Danish Family with Nonsyndromic Hearing Impairment.

Nyegaard M, Rendtorff ND, Nielsen MS, Corydon TJ, Demontis D, Starnawska A, Hedemand A, Buniello A, Niola F, Overgaard MT, Leal SM, Ahmad W, Wikman FP, Petersen KB, Crüger DG, Oostrik J, Kremer H, Tommerup N, Frödin M, Steel KP, Tranebjærg L, Børglum AD.

PLoS Genet. 2015 Jul 21;11(7):e1005386. doi: 10.1371/journal.pgen.1005386. eCollection 2015 Jul.


Widespread intron retention diversifies most cancer transcriptomes.

Dvinge H, Bradley RK.

Genome Med. 2015 May 15;7(1):45. doi: 10.1186/s13073-015-0168-9. eCollection 2015.


A critical role of RBM8a in proliferation and differentiation of embryonic neural progenitors.

Zou D, McSweeney C, Sebastian A, Reynolds DJ, Dong F, Zhou Y, Deng D, Wang Y, Liu L, Zhu J, Zou J, Shi Y, Albert I, Mao Y.

Neural Dev. 2015 Jun 21;10:18. doi: 10.1186/s13064-015-0045-7.


The structure of the SOLE element of oskar mRNA.

Simon B, Masiewicz P, Ephrussi A, Carlomagno T.

RNA. 2015 Aug;21(8):1444-53. doi: 10.1261/rna.049601.115. Epub 2015 Jun 18.


Resistance of mRNAs with AUG-proximal nonsense mutations to nonsense-mediated decay reflects variables of mRNA structure and translational activity.

Pereira FJ, Teixeira A, Kong J, Barbosa C, Silva AL, Marques-Ramos A, Liebhaber SA, Romão L.

Nucleic Acids Res. 2015 Jul 27;43(13):6528-44. doi: 10.1093/nar/gkv588. Epub 2015 Jun 11.


CWC22-dependent pre-mRNA splicing and eIF4A3 binding enables global deposition of exon junction complexes.

Steckelberg AL, Altmueller J, Dieterich C, Gehring NH.

Nucleic Acids Res. 2015 May 19;43(9):4687-700. doi: 10.1093/nar/gkv320. Epub 2015 Apr 13.

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