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An AT-barrier mechanically controls DNA reannealing under tension.

Bongini L, Pongor C, Falorsi G, Pertici I, Kellermayer M, Lombardi V, Bianco P.

Nucleic Acids Res. 2016 Sep 19;44(16):7954-62. doi: 10.1093/nar/gkw604. Epub 2016 Jul 4.


Molecular Combing of Single DNA Molecules on the 10 Megabase Scale.

Kaykov A, Taillefumier T, Bensimon A, Nurse P.

Sci Rep. 2016 Jan 19;6:19636. doi: 10.1038/srep19636.


Heat conductivity of DNA double helix.

Savin AV, Mazo MA, Kikot IP, Manevitch LI, Onufriev AV.

Phys Rev B Condens Matter Mater Phys. 2011 Jun 15;83(24). pii: 245406.


Nanoscale Pulling of Type IV Pili Reveals Their Flexibility and Adhesion to Surfaces over Extended Lengths of the Pili.

Lu S, Giuliani M, Harvey H, Burrows LL, Wickham RA, Dutcher JR.

Biophys J. 2015 Jun 16;108(12):2865-75. doi: 10.1016/j.bpj.2015.05.016.


Determination of base binding strength and base stacking interaction of DNA duplex using atomic force microscope.

Zhang TB, Zhang CL, Dong ZL, Guan YF.

Sci Rep. 2015 Mar 16;5:9143. doi: 10.1038/srep09143.


Internal vs fishhook hairpin DNA: unzipping locations and mechanisms in the α-hemolysin nanopore.

Ding Y, Fleming AM, White HS, Burrows CJ.

J Phys Chem B. 2014 Nov 13;118(45):12873-82. doi: 10.1021/jp5101413. Epub 2014 Nov 3.


Electronic detection of dsDNA transition from helical to zipper conformation using graphene nanopores.

Sathe C, Girdhar A, Leburton JP, Schulten K.

Nanotechnology. 2014 Nov 7;25(44):445105. doi: 10.1088/0957-4484/25/44/445105. Epub 2014 Oct 17.


Force-induced melting of DNA--evidence for peeling and internal melting from force spectra on short synthetic duplex sequences.

Bosaeus N, El-Sagheer AH, Brown T, Åkerman B, Nordén B.

Nucleic Acids Res. 2014 Jul;42(12):8083-91. doi: 10.1093/nar/gku441. Epub 2014 May 16.


Transient kinetics measured with force steps discriminate between double-stranded DNA elongation and melting and define the reaction energetics.

Bongini L, Melli L, Lombardi V, Bianco P.

Nucleic Acids Res. 2014 Mar;42(5):3436-49. doi: 10.1093/nar/gkt1297. Epub 2013 Dec 17.


Elastic properties and secondary structure formation of single-stranded DNA at monovalent and divalent salt conditions.

Bosco A, Camunas-Soler J, Ritort F.

Nucleic Acids Res. 2014 Feb;42(3):2064-74. doi: 10.1093/nar/gkt1089. Epub 2013 Nov 12.


Force-induced unzipping transitions in an athermal crowded environment.

Pincus DL, Thirumalai D.

J Phys Chem B. 2013 Oct 24;117(42):13107-14. doi: 10.1021/jp402922q. Epub 2013 Jul 12.


Uncovering ultrastructural defences in Daphnia magna--an interdisciplinary approach to assess the predator-induced fortification of the carapace.

Rabus M, Söllradl T, Clausen-Schaumann H, Laforsch C.

PLoS One. 2013 Jun 12;8(6):e67856. doi: 10.1371/journal.pone.0067856. Print 2013.


Multiscale mechanobiology: mechanics at the molecular, cellular, and tissue levels.

Guo CL, Harris NC, Wijeratne SS, Frey EW, Kiang CH.

Cell Biosci. 2013 Jun 3;3(1):25. doi: 10.1186/2045-3701-3-25.


Understanding the physics of DNA using nanoscale single-molecule manipulation.

Frey EW, Gooding AA, Wijeratne S, Kiang CH.

Front Phys. 2012 Oct;7(5):576-581.


Two-phase stretching of molecular chains.

Savin AV, Kikot IP, Mazo MA, Onufriev AV.

Proc Natl Acad Sci U S A. 2013 Feb 19;110(8):2816-21. doi: 10.1073/pnas.1218677110. Epub 2013 Feb 1.


Toward detection of DNA-bound proteins using solid-state nanopores: insights from computer simulations.

Comer J, Ho A, Aksimentiev A.

Electrophoresis. 2012 Dec;33(23):3466-79. doi: 10.1002/elps.201200164. Epub 2012 Nov 12.


Tension induces a base-paired overstretched DNA conformation.

Bosaeus N, El-Sagheer AH, Brown T, Smith SB, Akerman B, Bustamante C, Nordén B.

Proc Natl Acad Sci U S A. 2012 Sep 18;109(38):15179-84. Epub 2012 Sep 4.


Routine and timely sub-picoNewton force stability and precision for biological applications of atomic force microscopy.

Churnside AB, Sullan RM, Nguyen DM, Case SO, Bull MS, King GM, Perkins TT.

Nano Lett. 2012 Jul 11;12(7):3557-61. doi: 10.1021/nl301166w. Epub 2012 Jun 15.


Long lifetime of hydrogen-bonded DNA basepairs by force spectroscopy.

Fuhrmann A, Getfert S, Fu Q, Reimann P, Lindsay S, Ros R.

Biophys J. 2012 May 16;102(10):2381-90. doi: 10.1016/j.bpj.2012.04.006. Epub 2012 May 15.

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