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Items: 1 to 20 of 25

1.

Inclusion of the fitness sharing technique in an evolutionary algorithm to analyze the fitness landscape of the genetic code adaptability.

Santos J, Monteagudo Á.

BMC Bioinformatics. 2017 Mar 27;18(1):195. doi: 10.1186/s12859-017-1608-x.

2.

On Nature's Strategy for Assigning Genetic Code Multiplicity.

Gardini S, Cheli S, Baroni S, Di Lascio G, Mangiavacchi G, Micheletti N, Monaco CL, Savini L, Alocci D, Mangani S, Niccolai N.

PLoS One. 2016 Feb 5;11(2):e0148174. doi: 10.1371/journal.pone.0148174. eCollection 2016.

4.

A multiobjective approach to the genetic code adaptability problem.

de Oliveira LL, de Oliveira PS, Tinós R.

BMC Bioinformatics. 2015 Feb 19;16:52. doi: 10.1186/s12859-015-0480-9.

5.

Does the genetic code have a eukaryotic origin?

Zhang Z, Yu J.

Genomics Proteomics Bioinformatics. 2013 Feb;11(1):41-55. doi: 10.1016/j.gpb.2013.01.001. Epub 2013 Jan 20.

6.

Simulated evolution applied to study the genetic code optimality using a model of codon reassignments.

Santos J, Monteagudo A.

BMC Bioinformatics. 2011 Feb 21;12:56. doi: 10.1186/1471-2105-12-56.

7.
8.

Imprints of the genetic code in the ribosome.

Johnson DB, Wang L.

Proc Natl Acad Sci U S A. 2010 May 4;107(18):8298-303. doi: 10.1073/pnas.1000704107. Epub 2010 Apr 12.

9.

RNA editing of 10 Didymium iridis mitochondrial genes and comparison with the homologous genes in Physarum polycephalum.

Traphagen SJ, Dimarco MJ, Silliker ME.

RNA. 2010 Apr;16(4):828-38. doi: 10.1261/rna.1989310. Epub 2010 Feb 16.

10.

Exceptional error minimization in putative primordial genetic codes.

Novozhilov AS, Koonin EV.

Biol Direct. 2009 Nov 19;4:44. doi: 10.1186/1745-6150-4-44.

11.

Codon size reduction as the origin of the triplet genetic code.

Baranov PV, Venin M, Provan G.

PLoS One. 2009 May 27;4(5):e5708. doi: 10.1371/journal.pone.0005708.

12.

Origin and evolution of the genetic code: the universal enigma.

Koonin EV, Novozhilov AS.

IUBMB Life. 2009 Feb;61(2):99-111. doi: 10.1002/iub.146. Review.

13.

Evidence from glycine transfer RNA of a frozen accident at the dawn of the genetic code.

Bernhardt HS, Tate WP.

Biol Direct. 2008 Dec 17;3:53. doi: 10.1186/1745-6150-3-53.

18.

On the evolution of the standard amino-acid alphabet.

Lu Y, Freeland S.

Genome Biol. 2006;7(1):102. Epub 2006 Feb 1.

19.

A mechanism for the association of amino acids with their codons and the origin of the genetic code.

Copley SD, Smith E, Morowitz HJ.

Proc Natl Acad Sci U S A. 2005 Mar 22;102(12):4442-7. Epub 2005 Mar 11.

20.

Nitrogen versus carbon use in prokaryotic genomes and proteomes.

Bragg JG, Hyder CL.

Proc Biol Sci. 2004 Aug 7;271 Suppl 5:S374-7.

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