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Items: 1 to 20 of 231

1.

Crystal structure of a hepatitis delta virus ribozyme.

Ferré-D'Amaré AR, Zhou K, Doudna JA.

Nature. 1998 Oct 8;395(6702):567-74.

PMID:
9783582
2.
4.

A conformational switch controls hepatitis delta virus ribozyme catalysis.

Ke A, Zhou K, Ding F, Cate JH, Doudna JA.

Nature. 2004 May 13;429(6988):201-5.

PMID:
15141216
5.

Ribozymes of the hepatitis delta virus: recent findings on their structure, mechanism of catalysis and possible applications.

Ciesiolka J, Wrzesinski J, Legiewicz M, Smólska B, Dutkiewicz M.

Acta Biochim Pol. 2001;48(2):409-18. Review.

6.

A three-dimensional model of hepatitis delta virus ribozyme based on biochemical and mutational analyses.

Tanner NK, Schaff S, Thill G, Petit-Koskas E, Crain-Denoyelle AM, Westhof E.

Curr Biol. 1994 Jun 1;4(6):488-98.

PMID:
7922369
7.

Structural dynamics of precursor and product of the RNA enzyme from the hepatitis delta virus as revealed by molecular dynamics simulations.

Krasovska MV, Sefcikova J, Spacková N, Sponer J, Walter NG.

J Mol Biol. 2005 Aug 26;351(4):731-48.

PMID:
16045932
8.

Impact of an extruded nucleotide on cleavage activity and dynamic catalytic core conformation of the hepatitis delta virus ribozyme.

Sefcikova J, Krasovska MV, Spacková N, Sponer J, Walter NG.

Biopolymers. 2007 Apr 5-15;85(5-6):392-406.

9.

Chemical probing studies of the hepatitis delta virus (HDV) genomic ribozyme.

Nishikawa S, Kumar PK, Jeoung YH, Kawakami J, Nishikawa F, Suh Y, Ohtsuka E, Taira K.

Nucleic Acids Symp Ser. 1993;(29):119-20.

PMID:
8247731
10.

Importance of short pseudoknot base pairs between two single-stranded regions of HDV ribozyme.

Nishikawa F, Shirai M, Nishikawa S.

Nucleic Acids Symp Ser. 1999;(42):287-8.

PMID:
10780492
11.

In vitro selection analysis of trans-acting HDV ribozyme.

Nishikawa F, Chiba A, Shirai M, Fauzi H, Taira K, Kumar PK, Nishikawa S.

Nucleic Acids Symp Ser. 1995;(34):115-6.

PMID:
8841579
12.

Catalytic core structure of the trans-acting HDV ribozyme is subtly influenced by sequence variation outside the core.

Gondert ME, Tinsley RA, Rueda D, Walter NG.

Biochemistry. 2006 Jun 20;45(24):7563-73.

PMID:
16768452
13.
15.

Ribozyme activity in the genomic and antigenomic RNA strands of hepatitis delta virus.

Wadkins TS, Been MD.

Cell Mol Life Sci. 2002 Jan;59(1):112-25. Review.

PMID:
11846024
16.
17.
18.

Magnesium dependence of the amplified conformational switch in the trans-acting hepatitis delta virus ribozyme.

Tinsley RA, Harris DA, Walter NG.

Biochemistry. 2004 Jul 20;43(28):8935-45.

PMID:
15248751
19.
20.

Reaction pathway of the trans-acting hepatitis delta virus ribozyme: a conformational change accompanies catalysis.

Pereira MJ, Harris DA, Rueda D, Walter NG.

Biochemistry. 2002 Jan 22;41(3):730-40.

PMID:
11790094

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