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Items: 1 to 20 of 181

1.

Proclass protein family database: new version with motif alignments.

Wu CH, Shivakumar S.

Pac Symp Biocomput. 1998:719-30.

2.

ProClass Protein Family Database.

Wu CH, Shivakumar S, Huang H.

Nucleic Acids Res. 1999 Jan 1;27(1):272-4.

3.

ProClass protein family database.

Huang H, Xiao C, Wu CH.

Nucleic Acids Res. 2000 Jan 1;28(1):273-6.

4.

A protein class database organized with ProSite protein groups and PIR superfamilies.

Wu CH, Zhao S, Chen HL.

J Comput Biol. 1996 Winter;3(4):547-61.

PMID:
9018603
5.

A Web-based classification system of DNA-binding protein families.

Karmirantzou M, Hamodrakas SJ.

Protein Eng. 2001 Jul;14(7):465-72.

PMID:
11522919
6.

GeneFIND web server for protein family identification and information retrieval.

Wu CH, Shivakumar S, Shivakumar CV, Chen SC.

Bioinformatics. 1998;14(2):223-4.

PMID:
9545458
7.

PIR-ALN: a database of protein sequence alignments.

Srinivasarao GY, Yeh LS, Marzec CR, Orcutt BC, Barker WC.

Bioinformatics. 1999 May;15(5):382-90.

PMID:
10366659
8.

Blocks+: a non-redundant database of protein alignment blocks derived from multiple compilations.

Henikoff S, Henikoff JG, Pietrokovski S.

Bioinformatics. 1999 Jun;15(6):471-9.

PMID:
10383472
9.

The PIR-International Protein Sequence Database.

Barker WC, Garavelli JS, McGarvey PB, Marzec CR, Orcutt BC, Srinivasarao GY, Yeh LS, Ledley RS, Mewes HW, Pfeiffer F, Tsugita A, Wu C.

Nucleic Acids Res. 1999 Jan 1;27(1):39-43.

10.

Database of protein sequence alignments: PIR-ALN.

Srinivasarao GY, Yeh LS, Marzec CR, Orcutt BC, Barker WC, Pfeiffer F.

Nucleic Acids Res. 1999 Jan 1;27(1):284-5.

11.

The ProDom database of protein domain families.

Corpet F, Gouzy J, Kahn D.

Nucleic Acids Res. 1998 Jan 1;26(1):323-6.

12.

Recent improvements of the ProDom database of protein domain families.

Corpet F, Gouzy J, Kahn D.

Nucleic Acids Res. 1999 Jan 1;27(1):263-7.

13.

PASS2: an automated database of protein alignments organised as structural superfamilies.

Bhaduri A, Pugalenthi G, Sowdhamini R.

BMC Bioinformatics. 2004 Apr 2;5:35.

14.

PROSITE: a documented database using patterns and profiles as motif descriptors.

Sigrist CJ, Cerutti L, Hulo N, Gattiker A, Falquet L, Pagni M, Bairoch A, Bucher P.

Brief Bioinform. 2002 Sep;3(3):265-74.

PMID:
12230035
15.

The SBASE protein domain library, release 6.0: a collection of annotated protein sequence segments.

Murvai J, Vlahovicek K, Barta E, Szepesvári C, Acatrinei C, Pongor S.

Nucleic Acids Res. 1999 Jan 1;27(1):257-9.

16.

PASS2: a semi-automated database of protein alignments organised as structural superfamilies.

Mallika V, Bhaduri A, Sowdhamini R.

Nucleic Acids Res. 2002 Jan 1;30(1):284-8.

17.

PROSITE, a protein domain database for functional characterization and annotation.

Sigrist CJ, Cerutti L, de Castro E, Langendijk-Genevaux PS, Bulliard V, Bairoch A, Hulo N.

Nucleic Acids Res. 2010 Jan;38(Database issue):D161-6. doi: 10.1093/nar/gkp885. Epub 2009 Oct 25.

18.

The PROSITE database, its status in 1999.

Hofmann K, Bucher P, Falquet L, Bairoch A.

Nucleic Acids Res. 1999 Jan 1;27(1):215-9.

19.

iProClass: an integrated, comprehensive and annotated protein classification database.

Wu CH, Xiao C, Hou Z, Huang H, Barker WC.

Nucleic Acids Res. 2001 Jan 1;29(1):52-4.

20.

The SBASE protein domain library, release 5.0: a collection of annotated protein sequence segments.

Fábián P, Murvai J, Hátsági Z, Vlahovicek K, Hegyi H, Pongor S.

Nucleic Acids Res. 1997 Jan 1;25(1):240-3.

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