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Items: 1 to 20 of 93

1.

Statistical significance of ungapped sequence alignments.

Alexandrov NN, Solovyev VV.

Pac Symp Biocomput. 1998:463-72.

2.
3.

[Localization of conserved and variable segments in amino acid sequences of homologous proteins using a personal computer].

Kostetskiĭ PV, Vladimirova RR.

Mol Biol (Mosk). 1992 Jul-Aug;26(4):859-68. Russian.

PMID:
1435778
4.

Estimation of P-values for global alignments of protein sequences.

Webber C, Barton GJ.

Bioinformatics. 2001 Dec;17(12):1158-67.

PMID:
11751224
5.

Do aligned sequences share the same fold?

Abagyan RA, Batalov S.

J Mol Biol. 1997 Oct 17;273(1):355-68.

PMID:
9367768
6.
7.

ProClust: improved clustering of protein sequences with an extended graph-based approach.

Pipenbacher P, Schliep A, Schneckener S, Schönhuth A, Schomburg D, Schrader R.

Bioinformatics. 2002;18 Suppl 2:S182-91.

PMID:
12386002
8.

An efficient Z-score algorithm for assessing sequence alignments.

Booth HS, Maindonald JH, Wilson SR, Gready JE.

J Comput Biol. 2004;11(4):616-25.

PMID:
15579234
9.

Effective protein sequence comparison.

Pearson WR.

Methods Enzymol. 1996;266:227-58.

PMID:
8743688
11.

Generalized affine gap costs for protein sequence alignment.

Altschul SF.

Proteins. 1998 Jul 1;32(1):88-96.

PMID:
9672045
12.

A comprehensive system for evaluation of remote sequence similarity detection.

Qi Y, Sadreyev RI, Wang Y, Kim BH, Grishin NV.

BMC Bioinformatics. 2007 Aug 28;8:314.

13.

Making sense of score statistics for sequence alignments.

Pagni M, Jongeneel CV.

Brief Bioinform. 2001 Mar;2(1):51-67.

PMID:
11465063
14.

Improving the quality of twilight-zone alignments.

Jaroszewski L, Rychlewski L, Godzik A.

Protein Sci. 2000 Aug;9(8):1487-96.

15.
16.

Stochastic pairwise alignments.

Mückstein U, Hofacker IL, Stadler PF.

Bioinformatics. 2002;18 Suppl 2:S153-60.

PMID:
12385998
17.
18.

Convergent Island Statistics: a fast method for determining local alignment score significance.

Poleksic A, Danzer JF, Hambly K, Debe DA.

Bioinformatics. 2005 Jun 15;21(12):2827-31. Epub 2005 Apr 7.

PMID:
15817690
19.

Flexible sequence similarity searching with the FASTA3 program package.

Pearson WR.

Methods Mol Biol. 2000;132:185-219.

PMID:
10547837
20.

Estimating statistical significance of sequence alignments.

Waterman M.

Philos Trans R Soc Lond B Biol Sci. 1994 Jun 29;344(1310):383-90.

PMID:
7800708

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