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Items: 1 to 20 of 102

1.

NetOglyc: prediction of mucin type O-glycosylation sites based on sequence context and surface accessibility.

Hansen JE, Lund O, Tolstrup N, Gooley AA, Williams KL, Brunak S.

Glycoconj J. 1998 Feb;15(2):115-30.

PMID:
9557871
2.

Prediction of O-glycosylation of mammalian proteins: specificity patterns of UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase.

Hansen JE, Lund O, Engelbrecht J, Bohr H, Nielsen JO, Hansen JE.

Biochem J. 1995 Jun 15;308 ( Pt 3):801-13.

3.

Prediction, conservation analysis, and structural characterization of mammalian mucin-type O-glycosylation sites.

Julenius K, Mølgaard A, Gupta R, Brunak S.

Glycobiology. 2005 Feb;15(2):153-64. Epub 2004 Sep 22.

PMID:
15385431
4.

Analysis of O-glycosylation.

Calvete JJ, Sanz L.

Methods Mol Biol. 2008;446:281-92. doi: 10.1007/978-1-60327-084-7_20.

PMID:
18373265
5.

Scanning the available Dictyostelium discoideum proteome for O-linked GlcNAc glycosylation sites using neural networks.

Gupta R, Jung E, Gooley AA, Williams KL, Brunak S, Hansen J.

Glycobiology. 1999 Oct;9(10):1009-22.

PMID:
10521537
6.

O-GLYCBASE Version 3.0: a revised database of O-glycosylated proteins.

Hansen JE, Lund O, Nilsson J, Rapacki K, Brunak S.

Nucleic Acids Res. 1998 Jan 1;26(1):387-9.

7.

Prediction of mucin-type O-glycosylation sites by a two-staged strategy.

Cai Y, He J, Lu L.

Mol Divers. 2011 May;15(2):427-33. doi: 10.1007/s11030-010-9240-y. Epub 2010 Jul 22.

PMID:
20652405
8.

Human Immunodeficiency Virus and Simian Immunodeficiency Virus Maintain High Levels of Infectivity in the Complete Absence of Mucin-Type O-Glycosylation.

Termini JM, Church ES, Silver ZA, Haslam SM, Dell A, Desrosiers RC.

J Virol. 2017 Sep 12;91(19). pii: e01228-17. doi: 10.1128/JVI.01228-17. Print 2017 Oct 1.

9.

Discovery of the shortest sequence motif for high level mucin-type O-glycosylation.

Yoshida A, Suzuki M, Ikenaga H, Takeuchi M.

J Biol Chem. 1997 Jul 4;272(27):16884-8.

10.

An efficient approach for the characterization of mucin-type glycopeptides: the effect of O-glycosylation on the conformation of synthetic mucin peptides.

Hashimoto R, Fujitani N, Takegawa Y, Kurogochi M, Matsushita T, Naruchi K, Ohyabu N, Hinou H, Gao XD, Manri N, Satake H, Kaneko A, Sakamoto T, Nishimura S.

Chemistry. 2011 Feb 18;17(8):2393-404. doi: 10.1002/chem.201002754. Epub 2011 Jan 24.

PMID:
21264968
11.

Sequence and structure-based prediction of eukaryotic protein phosphorylation sites.

Blom N, Gammeltoft S, Brunak S.

J Mol Biol. 1999 Dec 17;294(5):1351-62.

PMID:
10600390
12.

O-GLYCBASE: a revised database of O-glycosylated proteins.

Hansen JE, Lund O, Nielsen JO, Hansen JE, Brunak S.

Nucleic Acids Res. 1996 Jan 1;24(1):248-52.

13.

Prediction of mucin-type O-glycosylation sites in mammalian proteins using the composition of k-spaced amino acid pairs.

Chen YZ, Tang YR, Sheng ZY, Zhang Z.

BMC Bioinformatics. 2008 Feb 18;9:101. doi: 10.1186/1471-2105-9-101.

14.

Database analysis of O-glycosylation sites in proteins.

Thanka Christlet TH, Veluraja K.

Biophys J. 2001 Feb;80(2):952-60.

15.

O-GLYCBASE version 4.0: a revised database of O-glycosylated proteins.

Gupta R, Birch H, Rapacki K, Brunak S, Hansen JE.

Nucleic Acids Res. 1999 Jan 1;27(1):370-2.

16.

O-GLYCBASE version 2.0: a revised database of O-glycosylated proteins.

Hansen JE, Lund O, Rapacki K, Brunak S.

Nucleic Acids Res. 1997 Jan 1;25(1):278-82.

17.

Mucin-type O-glycosylation is controlled by short- and long-range glycopeptide substrate recognition that varies among members of the polypeptide GalNAc transferase family.

Revoredo L, Wang S, Bennett EP, Clausen H, Moremen KW, Jarvis DL, Ten Hagen KG, Tabak LA, Gerken TA.

Glycobiology. 2016 Apr;26(4):360-76. doi: 10.1093/glycob/cwv108. Epub 2015 Nov 26.

18.

Influence of the amino acid sequence on the MUC5AC motif peptide O-glycosylation by human gastric UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase(s).

Hennebicq S, Tetaert D, Soudan B, Boersma A, Briand G, Richet C, Gagnon J, Degand P.

Glycoconj J. 1998 Mar;15(3):275-82.

PMID:
9579804

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