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Items: 1 to 20 of 116

1.

Empirical statistical estimates for sequence similarity searches.

Pearson WR.

J Mol Biol. 1998 Feb 13;276(1):71-84.

PMID:
9514730
3.

Effective protein sequence comparison.

Pearson WR.

Methods Enzymol. 1996;266:227-58.

PMID:
8743688
4.

Flexible sequence similarity searching with the FASTA3 program package.

Pearson WR.

Methods Mol Biol. 2000;132:185-219.

PMID:
10547837
5.

Sensitivity and selectivity in protein similarity searches: a comparison of Smith-Waterman in hardware to BLAST and FASTA.

Shpaer EG, Robinson M, Yee D, Candlin JD, Mines R, Hunkapiller T.

Genomics. 1996 Dec 1;38(2):179-91.

PMID:
8954800
6.

Statistics of large-scale sequence searching.

Spang R, Vingron M.

Bioinformatics. 1998;14(3):279-84.

PMID:
9614271
7.
8.
9.
10.

BLAST and FASTA similarity searching for multiple sequence alignment.

Pearson WR.

Methods Mol Biol. 2014;1079:75-101. doi: 10.1007/978-1-62703-646-7_5.

PMID:
24170396
11.
12.

Clustering protein sequences--structure prediction by transitive homology.

Bolten E, Schliep A, Schneckener S, Schomburg D, Schrader R.

Bioinformatics. 2001 Oct;17(10):935-41.

PMID:
11673238
14.

Comparison of DNA sequences with protein sequences.

Pearson WR, Wood T, Zhang Z, Miller W.

Genomics. 1997 Nov 15;46(1):24-36.

PMID:
9403055
15.

Estimation of P-values for global alignments of protein sequences.

Webber C, Barton GJ.

Bioinformatics. 2001 Dec;17(12):1158-67.

PMID:
11751224
16.

Combining sensitive database searches with multiple intermediates to detect distant homologues.

Salamov AA, Suwa M, Orengo CA, Swindells MB.

Protein Eng. 1999 Feb;12(2):95-100.

PMID:
10195280
17.

Rapid and sensitive sequence comparison with FASTP and FASTA.

Pearson WR.

Methods Enzymol. 1990;183:63-98.

PMID:
2156132
18.

A platform for biological sequence comparison on parallel computers.

Deshpande AS, Richards DS, Pearson WR.

Comput Appl Biosci. 1991 Apr;7(2):237-47.

PMID:
2059850
19.
20.

Using a FASTA Sequence Database Similarity Search.

Mount DW.

CSH Protoc. 2007 Jul 1;2007:pdb.top16. doi: 10.1101/pdb.top16.

PMID:
21357134

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