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Items: 1 to 20 of 111

1.

Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information.

Hebsgaard SM, Korning PG, Tolstrup N, Engelbrecht J, Rouzé P, Brunak S.

Nucleic Acids Res. 1996 Sep 1;24(17):3439-52.

2.

Analysis and recognition of 5' UTR intron splice sites in human pre-mRNA.

Eden E, Brunak S.

Nucleic Acids Res. 2004 Feb 11;32(3):1131-42. Print 2004.

4.

Prediction of human mRNA donor and acceptor sites from the DNA sequence.

Brunak S, Engelbrecht J, Knudsen S.

J Mol Biol. 1991 Jul 5;220(1):49-65.

PMID:
2067018
5.

Prediction of splice sites in plant pre-mRNA from sequence properties.

Brendel V, Kleffe J, Carle-Urioste JC, Walbot V.

J Mol Biol. 1998 Feb 13;276(1):85-104.

PMID:
9514728
6.

Cleaning the GenBank Arabidopsis thaliana data set.

Korning PG, Hebsgaard SM, Rouze P, Brunak S.

Nucleic Acids Res. 1996 Jan 15;24(2):316-20.

7.

Logitlinear models for the prediction of splice sites in plant pre-mRNA sequences.

Kleffe J, Hermann K, Vahrson W, Wittig B, Brendel V.

Nucleic Acids Res. 1996 Dec 1;24(23):4709-18.

8.
9.

Feature subset selection for splice site prediction.

Degroeve S, De Baets B, Van de Peer Y, Rouzé P.

Bioinformatics. 2002;18 Suppl 2:S75-83.

PMID:
12385987
10.

Detection and prediction of alternative splicing in Arabidopsis thaliana.

Park M, Falcone DL, Daniels KM.

Int J Comput Biol Drug Des. 2008;1(1):39-58.

PMID:
20055000
11.

Arabidopsis intron mutations and pre-mRNA splicing.

Brown JW.

Plant J. 1996 Nov;10(5):771-80. Review.

12.
13.

Computational analysis of splicing errors and mutations in human transcripts.

Kurmangaliyev YZ, Gelfand MS.

BMC Genomics. 2008 Jan 14;9:13. doi: 10.1186/1471-2164-9-13.

14.

Single base-pair substitutions in exon-intron junctions of human genes: nature, distribution, and consequences for mRNA splicing.

Krawczak M, Thomas NS, Hundrieser B, Mort M, Wittig M, Hampe J, Cooper DN.

Hum Mutat. 2007 Feb;28(2):150-8.

PMID:
17001642
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Mutation of putative branchpoint consensus sequences in plant introns reduces splicing efficiency.

Simpson CG, Clark G, Davidson D, Smith P, Brown JW.

Plant J. 1996 Mar;9(3):369-80.

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