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Gut Microbiota Has a Widespread and Modifiable Effect on Host Gene Regulation.

Richards AL, Muehlbauer AL, Alazizi A, Burns MB, Findley A, Messina F, Gould TJ, Cascardo C, Pique-Regi R, Blekhman R, Luca F.

mSystems. 2019 Sep 3;4(5). pii: e00323-18. doi: 10.1128/mSystems.00323-18.


Interaction between Host MicroRNAs and the Gut Microbiota in Colorectal Cancer.

Yuan C, Burns MB, Subramanian S, Blekhman R.

mSystems. 2018 May 15;3(3). pii: e00205-17. doi: 10.1128/mSystems.00205-17. eCollection 2018 May-Jun.


Manipulation of gut microbiota during critical developmental windows affects host physiological performance and disease susceptibility across ontogeny.

Warne RW, Kirschman L, Zeglin L.

J Anim Ecol. 2019 Jun;88(6):845-856. doi: 10.1111/1365-2656.12973. Epub 2019 Mar 28.


Reproducible changes in the gut microbiome suggest a shift in microbial and host metabolism during spaceflight.

Jiang P, Green SJ, Chlipala GE, Turek FW, Vitaterna MH.

Microbiome. 2019 Aug 9;7(1):113. doi: 10.1186/s40168-019-0724-4.


The Core Gut Microbiome of the American Cockroach, Periplaneta americana, Is Stable and Resilient to Dietary Shifts.

Tinker KA, Ottesen EA.

Appl Environ Microbiol. 2016 Oct 27;82(22):6603-6610. Print 2016 Nov 15.


Genetic and transcriptional analysis of human host response to healthy gut microbiota.

Richards AL, Burns MB, Alazizi A, Barreiro LB, Pique-Regi R, Blekhman R, Luca F.

mSystems. 2016 Jul-Aug;1(4). pii: e00067-16. Epub 2016 Aug 30.


Active migration is associated with specific and consistent changes to gut microbiota in Calidris shorebirds.

Risely A, Waite DW, Ujvari B, Hoye BJ, Klaassen M.

J Anim Ecol. 2018 Mar;87(2):428-437. doi: 10.1111/1365-2656.12784. Epub 2017 Dec 18.


Development of Inflammatory Bowel Disease Is Linked to a Longitudinal Restructuring of the Gut Metagenome in Mice.

Sharpton T, Lyalina S, Luong J, Pham J, Deal EM, Armour C, Gaulke C, Sanjabi S, Pollard KS.

mSystems. 2017 Sep 5;2(5). pii: e00036-17. doi: 10.1128/mSystems.00036-17. eCollection 2017 Sep-Oct.


Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation.

Agler MT, Ruhe J, Kroll S, Morhenn C, Kim ST, Weigel D, Kemen EM.

PLoS Biol. 2016 Jan 20;14(1):e1002352. doi: 10.1371/journal.pbio.1002352. eCollection 2016 Jan.


How gut transcriptional function of Drosophila melanogaster varies with the presence and composition of the gut microbiota.

Bost A, Franzenburg S, Adair KL, Martinson VG, Loeb G, Douglas AE.

Mol Ecol. 2018 Apr;27(8):1848-1859. doi: 10.1111/mec.14413. Epub 2017 Dec 2.


The potential impact of gut microbiota on your health:Current status and future challenges.

Sirisinha S.

Asian Pac J Allergy Immunol. 2016 Dec;34(4):249-264. doi: 10.12932/AP0803. Review.


Total Lipopolysaccharide from the Human Gut Microbiome Silences Toll-Like Receptor Signaling.

d'Hennezel E, Abubucker S, Murphy LO, Cullen TW.

mSystems. 2017 Nov 14;2(6). pii: e00046-17. doi: 10.1128/mSystems.00046-17. eCollection 2017 Nov-Dec.


Functional variation in the gut microbiome of wild Drosophila populations.

Bost A, Martinson VG, Franzenburg S, Adair KL, Albasi A, Wells MT, Douglas AE.

Mol Ecol. 2018 Jul;27(13):2834-2845. doi: 10.1111/mec.14728. Epub 2018 Jun 10.


Intrinsic association between diet and the gut microbiome: current evidence.

Winglee K, Fodor AA.

Nutr Diet Suppl. 2015;7:69-76. doi: 10.2147/NDS.S62362. Epub 2015 Oct 7.


Moderate Exercise Has Limited but Distinguishable Effects on the Mouse Microbiome.

Lamoureux EV, Grandy SA, Langille MGI.

mSystems. 2017 Aug 22;2(4). pii: e00006-17. doi: 10.1128/mSystems.00006-17. eCollection 2017 Jul-Aug.


Lifestyle alters GUT-bacteria function: Linking immune response and host.

Jazayeri O, Daghighi SM, Rezaee F.

Best Pract Res Clin Gastroenterol. 2017 Dec;31(6):625-635. doi: 10.1016/j.bpg.2017.09.009. Epub 2017 Sep 6. Review.


Do host-associated gut microbiota mediate the effect of an herbicide on disease risk in frogs?

Knutie SA, Gabor CR, Kohl KD, Rohr JR.

J Anim Ecol. 2018 Mar;87(2):489-499. doi: 10.1111/1365-2656.12769. Epub 2017 Nov 27.


Mechanistic links between gut microbial community dynamics, microbial functions and metabolic health.

Ha CW, Lam YY, Holmes AJ.

World J Gastroenterol. 2014 Nov 28;20(44):16498-517. doi: 10.3748/wjg.v20.i44.16498. Review.


A metagenomic study of diet-dependent interaction between gut microbiota and host in infants reveals differences in immune response.

Schwartz S, Friedberg I, Ivanov IV, Davidson LA, Goldsby JS, Dahl DB, Herman D, Wang M, Donovan SM, Chapkin RS.

Genome Biol. 2012 Apr 30;13(4):r32. doi: 10.1186/gb-2012-13-4-r32.


The Gills of Reef Fish Support a Distinct Microbiome Influenced by Host-Specific Factors.

Pratte ZA, Besson M, Hollman RD, Stewart FJ.

Appl Environ Microbiol. 2018 Apr 16;84(9). pii: e00063-18. doi: 10.1128/AEM.00063-18. Print 2018 May 1.

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