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Items: 1 to 20 of 104

1.

Protein Dynamics Preceding Photoisomerization of the Retinal Chromophore in Bacteriorhodopsin Revealed by Deep-UV Femtosecond Stimulated Raman Spectroscopy.

Tahara S, Kuramochi H, Takeuchi S, Tahara T.

J Phys Chem Lett. 2019 Sep 19;10(18):5422-5427. doi: 10.1021/acs.jpclett.9b02283. Epub 2019 Aug 30.

PMID:
31469573
2.

Ultrafast photoreaction dynamics of a light-driven sodium-ion-pumping retinal protein from Krokinobacter eikastus revealed by femtosecond time-resolved absorption spectroscopy.

Tahara S, Takeuchi S, Abe-Yoshizumi R, Inoue K, Ohtani H, Kandori H, Tahara T.

J Phys Chem Lett. 2015 Nov 19;6(22):4481-6. doi: 10.1021/acs.jpclett.5b01994. Epub 2015 Oct 30.

PMID:
26582475
3.

Structural changes of pharaonis phoborhodopsin upon photoisomerization of the retinal chromophore: infrared spectral comparison with bacteriorhodopsin.

Kandori H, Shimono K, Sudo Y, Iwamoto M, Shichida Y, Kamo N.

Biochemistry. 2001 Aug 7;40(31):9238-46.

PMID:
11478891
4.

Direct observation of the femtosecond excited-state cis-trans isomerization in bacteriorhodopsin.

Mathies RA, Brito Cruz CH, Pollard WT, Shank CV.

Science. 1988 May 6;240(4853):777-9.

PMID:
3363359
5.

Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin.

Nass Kovacs G, Colletier JP, Grünbein ML, Yang Y, Stensitzki T, Batyuk A, Carbajo S, Doak RB, Ehrenberg D, Foucar L, Gasper R, Gorel A, Hilpert M, Kloos M, Koglin JE, Reinstein J, Roome CM, Schlesinger R, Seaberg M, Shoeman RL, Stricker M, Boutet S, Haacke S, Heberle J, Heyne K, Domratcheva T, Barends TRM, Schlichting I.

Nat Commun. 2019 Jul 18;10(1):3177. doi: 10.1038/s41467-019-10758-0.

6.

Ultrafast pump-probe study of the primary photoreaction process in pharaonis halorhodopsin: halide ion dependence and isomerization dynamics.

Nakamura T, Takeuchi S, Shibata M, Demura M, Kandori H, Tahara T.

J Phys Chem B. 2008 Oct 9;112(40):12795-800. doi: 10.1021/jp803282s. Epub 2008 Sep 13.

PMID:
18793013
7.

Picosecond time-resolved ultraviolet resonance Raman spectroscopy of bacteriorhodopsin: primary protein response to the photoisomerization of retinal.

Mizuno M, Shibata M, Yamada J, Kandori H, Mizutani Y.

J Phys Chem B. 2009 Sep 3;113(35):12121-8. doi: 10.1021/jp904388w.

PMID:
19678662
8.

Femtosecond infrared spectroscopy of bacteriorhodopsin chromophore isomerization.

Herbst J, Heyne K, Diller R.

Science. 2002 Aug 2;297(5582):822-5.

9.
10.

Femtosecond spectroscopic study of photochromic reactions of bacteriorhodopsin and visual rhodopsin.

Feldman TB, Smitienko OA, Shelaev IV, Gostev FE, Nekrasova OV, Dolgikh DA, Nadtochenko VA, Kirpichnikov MP, Ostrovsky MA.

J Photochem Photobiol B. 2016 Nov;164:296-305. doi: 10.1016/j.jphotobiol.2016.09.041. Epub 2016 Oct 2.

PMID:
27723489
11.

Determination of retinal chromophore structure in bacteriorhodopsin with resonance Raman spectroscopy.

Smith SO, Lugtenburg J, Mathies RA.

J Membr Biol. 1985;85(2):95-109.

PMID:
4009698
12.

Femtosecond time-resolved stimulated Raman reveals the birth of bacteriorhodopsin's J and K intermediates.

Shim S, Dasgupta J, Mathies RA.

J Am Chem Soc. 2009 Jun 10;131(22):7592-7. doi: 10.1021/ja809137x.

PMID:
19441850
13.
14.

Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.

Nogly P, Weinert T, James D, Carbajo S, Ozerov D, Furrer A, Gashi D, Borin V, Skopintsev P, Jaeger K, Nass K, Båth P, Bosman R, Koglin J, Seaberg M, Lane T, Kekilli D, Brünle S, Tanaka T, Wu W, Milne C, White T, Barty A, Weierstall U, Panneels V, Nango E, Iwata S, Hunter M, Schapiro I, Schertler G, Neutze R, Standfuss J.

Science. 2018 Jul 13;361(6398). pii: eaat0094. doi: 10.1126/science.aat0094. Epub 2018 Jun 14.

PMID:
29903883
15.

Real-time spectroscopy of transition states in bacteriorhodopsin during retinal isomerization.

Kobayashi T, Saito T, Ohtani H.

Nature. 2001 Nov 29;414(6863):531-4.

PMID:
11734850
16.

Femtosecond infrared spectroscopy of channelrhodopsin-1 chromophore isomerization.

Stensitzki T, Yang Y, Muders V, Schlesinger R, Heberle J, Heyne K.

Struct Dyn. 2016 Apr 29;3(4):043208. doi: 10.1063/1.4948338. eCollection 2016 Jul.

17.

The early steps in the photocycle of a photosensor protein sensory rhodopsin I from Salinibacter ruber.

Sudo Y, Mizuno M, Wei Z, Takeuchi S, Tahara T, Mizutani Y.

J Phys Chem B. 2014 Feb 13;118(6):1510-8. doi: 10.1021/jp4112662. Epub 2014 Jan 31.

PMID:
24447185
18.

The trans-cis isomerization reaction dynamics in sensory rhodopsin II by femtosecond time-resolved midinfrared spectroscopy: chromophore and protein dynamics.

Diller R, Jakober R, Schumann C, Peters F, Klare JP, Engelhard M.

Biopolymers. 2006 Jul;82(4):358-62.

PMID:
16475156
19.

Reaction pathways of photoexcited retinal in proteorhodopsin studied by pump-dump-probe spectroscopy.

Rupenyan A, van Stokkum IH, Arents JC, van Grondelle R, Hellingwerf KJ, Groot ML.

J Phys Chem B. 2009 Dec 17;113(50):16251-6. doi: 10.1021/jp9065289.

PMID:
19928893
20.

Photoisomerization in rhodopsin.

Kandori H, Shichida Y, Yoshizawa T.

Biochemistry (Mosc). 2001 Nov;66(11):1197-209. Review.

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