Similar articles for PMID: 31385553

Year	Number of Results
2002	1
2003	3
2004	2
2006	1
2007	1
2008	2
2010	1
2011	6
2012	3
2013	2
2014	5
2015	6
2016	7
2017	7
2018	11
2019	19
2020	10
2021	13
2022	1
2023	4
2024	1

1

Big data to knowledge: common pitfalls in transcriptomics data analysis and representation.

Abedi M, Fatehi R, Moradzadeh K, Gheisari Y. Abedi M, et al. RNA Biol. 2019 Nov;16(11):1531-1533. doi: 10.1080/15476286.2019.1652525. Epub 2019 Aug 12. RNA Biol. 2019. PMID: 31385553 Free PMC article.

2

A Beginner's Guide to Analysis of RNA Sequencing Data.

Koch CM, Chiu SF, Akbarpour M, Bharat A, Ridge KM, Bartom ET, Winter DR. Koch CM, et al. Am J Respir Cell Mol Biol. 2018 Aug;59(2):145-157. doi: 10.1165/rcmb.2017-0430TR. Am J Respir Cell Mol Biol. 2018. PMID: 29624415 Free PMC article.

3

MOPED 2.5--an integrated multi-omics resource: multi-omics profiling expression database now includes transcriptomics data.

Montague E, Stanberry L, Higdon R, Janko I, Lee E, Anderson N, Choiniere J, Stewart E, Yandl G, Broomall W, Kolker N, Kolker E. Montague E, et al. OMICS. 2014 Jun;18(6):335-43. doi: 10.1089/omi.2014.0061. OMICS. 2014. PMID: 24910945 Free PMC article.

4

A generic Transcriptomics Reporting Framework (TRF) for 'omics data processing and analysis.

Gant TW, Sauer UG, Zhang SD, Chorley BN, Hackermüller J, Perdichizzi S, Tollefsen KE, van Ravenzwaay B, Yauk C, Tong W, Poole A. Gant TW, et al. Regul Toxicol Pharmacol. 2017 Dec;91 Suppl 1(Suppl 1):S36-S45. doi: 10.1016/j.yrtph.2017.11.001. Epub 2017 Nov 4. Regul Toxicol Pharmacol. 2017. PMID: 29113939 Free PMC article. Review.

5

Integrative Analysis of Omics Big Data.

Yu XT, Zeng T. Yu XT, et al. Methods Mol Biol. 2018;1754:109-135. doi: 10.1007/978-1-4939-7717-8_7. Methods Mol Biol. 2018. PMID: 29536440

6

Insights into global mechanisms and disease by gene expression profiling.

Sánchez-Cabo F, Rainer J, Dopazo A, Trajanoski Z, Hackl H. Sánchez-Cabo F, et al. Methods Mol Biol. 2011;719:269-98. doi: 10.1007/978-1-61779-027-0_13. Methods Mol Biol. 2011. PMID: 21370089

7

Integrity, standards, and QC-related issues with big data in pre-clinical drug discovery.

Brothers JF 2nd, Ung M, Escalante-Chong R, Ross J, Zhang J, Cha Y, Lysaght A, Funt J, Kusko R. Brothers JF 2nd, et al. Biochem Pharmacol. 2018 Jun;152:84-93. doi: 10.1016/j.bcp.2018.03.014. Epub 2018 Mar 15. Biochem Pharmacol. 2018. PMID: 29551586 Review.

8

Microarray databases: standards and ontologies.

Stoeckert CJ Jr, Causton HC, Ball CA. Stoeckert CJ Jr, et al. Nat Genet. 2002 Dec;32 Suppl:469-73. doi: 10.1038/ng1028. Nat Genet. 2002. PMID: 12454640 Review.

9

Congruence of tissue expression profiles from Gene Expression Atlas, SAGEmap and TissueInfo databases.

Huminiecki L, Lloyd AT, Wolfe KH. Huminiecki L, et al. BMC Genomics. 2003 Jul 29;4(1):31. doi: 10.1186/1471-2164-4-31. BMC Genomics. 2003. PMID: 12885301 Free PMC article.

10

A tuberculosis ontology for host systems biology.

Levine DM, Dutta NK, Eckels J, Scanga C, Stein C, Mehra S, Kaushal D, Karakousis PC, Salamon H. Levine DM, et al. Tuberculosis (Edinb). 2015 Sep;95(5):570-4. doi: 10.1016/j.tube.2015.05.012. Epub 2015 Jun 30. Tuberculosis (Edinb). 2015. PMID: 26190839 Free PMC article.

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