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Determinants of target prioritization and regulatory hierarchy for the bacterial small RNA SgrS.

Bobrovskyy M, Azam MS, Frandsen JK, Zhang J, Poddar A, Ma X, Henkin TM, Ha T, Vanderpool CK.

Mol Microbiol. 2019 Oct;112(4):1199-1218. doi: 10.1111/mmi.14355. Epub 2019 Aug 6.


The small RNA SgrS: roles in metabolism and pathogenesis of enteric bacteria.

Bobrovskyy M, Vanderpool CK.

Front Cell Infect Microbiol. 2014 May 8;4:61. doi: 10.3389/fcimb.2014.00061. eCollection 2014. Review.


Physiological consequences of multiple-target regulation by the small RNA SgrS in Escherichia coli.

Sun Y, Vanderpool CK.

J Bacteriol. 2013 Nov;195(21):4804-15. doi: 10.1128/JB.00722-13. Epub 2013 Jul 19.


A dual function for a bacterial small RNA: SgrS performs base pairing-dependent regulation and encodes a functional polypeptide.

Wadler CS, Vanderpool CK.

Proc Natl Acad Sci U S A. 2007 Dec 18;104(51):20454-9. Epub 2007 Nov 27.


The small RNA SgrS controls sugar-phosphate accumulation by regulating multiple PTS genes.

Rice JB, Vanderpool CK.

Nucleic Acids Res. 2011 May;39(9):3806-19. doi: 10.1093/nar/gkq1219. Epub 2011 Jan 17.


Characterization of homologs of the small RNA SgrS reveals diversity in function.

Wadler CS, Vanderpool CK.

Nucleic Acids Res. 2009 Sep;37(16):5477-85. doi: 10.1093/nar/gkp591. Epub 2009 Jul 20.


Diverse mechanisms of post-transcriptional repression by the small RNA regulator of glucose-phosphate stress.

Bobrovskyy M, Vanderpool CK.

Mol Microbiol. 2016 Jan;99(2):254-73. doi: 10.1111/mmi.13230. Epub 2015 Oct 26.


The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair.

Papenfort K, Podkaminski D, Hinton JC, Vogel J.

Proc Natl Acad Sci U S A. 2012 Mar 27;109(13):E757-64. doi: 10.1073/pnas.1119414109. Epub 2012 Mar 1.


Analyses of mRNA destabilization and translational inhibition mediated by Hfq-binding small RNAs.

Morita T, Maki K, Yagi M, Aiba H.

Methods Enzymol. 2008;447:359-78. doi: 10.1016/S0076-6879(08)02218-0.


Deciphering the interplay between two independent functions of the small RNA regulator SgrS in Salmonella.

Balasubramanian D, Vanderpool CK.

J Bacteriol. 2013 Oct;195(20):4620-30. doi: 10.1128/JB.00586-13. Epub 2013 Aug 9.


Translational regulation by bacterial small RNAs via an unusual Hfq-dependent mechanism.

Azam MS, Vanderpool CK.

Nucleic Acids Res. 2018 Mar 16;46(5):2585-2599. doi: 10.1093/nar/gkx1286.


A minimal base-pairing region of a bacterial small RNA SgrS required for translational repression of ptsG mRNA.

Maki K, Morita T, Otaka H, Aiba H.

Mol Microbiol. 2010 May;76(3):782-92. doi: 10.1111/j.1365-2958.2010.07141.x. Epub 2010 Mar 25.


Homologs of the small RNA SgrS are broadly distributed in enteric bacteria but have diverged in size and sequence.

Horler RS, Vanderpool CK.

Nucleic Acids Res. 2009 Sep;37(16):5465-76. doi: 10.1093/nar/gkp501. Epub 2009 Jun 16.


Physiological consequences of small RNA-mediated regulation of glucose-phosphate stress.

Vanderpool CK.

Curr Opin Microbiol. 2007 Apr;10(2):146-51. Epub 2007 Mar 23. Review.


Stringent Response Regulators Contribute to Recovery from Glucose Phosphate Stress in Escherichia coli.

Kessler JR, Cobe BL, Richards GR.

Appl Environ Microbiol. 2017 Dec 1;83(24). pii: e01636-17. doi: 10.1128/AEM.01636-17. Print 2017 Dec 15.


A Modular Genetic System for High-Throughput Profiling and Engineering of Multi-Target Small RNAs.

Stimple SD, Lahiry A, Taris JE, Wood DW, Lease RA.

Methods Mol Biol. 2018;1737:373-391. doi: 10.1007/978-1-4939-7634-8_21.


PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action.

Otaka H, Ishikawa H, Morita T, Aiba H.

Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13059-64. doi: 10.1073/pnas.1107050108. Epub 2011 Jul 25.


Regulation of Transcription Termination of Small RNAs and by Small RNAs: Molecular Mechanisms and Biological Functions.

Chen J, Morita T, Gottesman S.

Front Cell Infect Microbiol. 2019 Jun 12;9:201. doi: 10.3389/fcimb.2019.00201. eCollection 2019. Review.

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